KEGG   Canis lupus familiaris (dog): 607183
Entry
607183            CDS       T01007                                 
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha precursor
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04060  Cytokine-cytokine receptor interaction
cfa04061  Viral protein interaction with cytokine and cytokine receptor
cfa04064  NF-kappa B signaling pathway
cfa04668  TNF signaling pathway
cfa04940  Type I diabetes mellitus
cfa05166  Human T-cell leukemia virus 1 infection
cfa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    607183 (LTA)
   04668 TNF signaling pathway
    607183 (LTA)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    607183 (LTA)
   04061 Viral protein interaction with cytokine and cytokine receptor
    607183 (LTA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    607183 (LTA)
   05168 Herpes simplex virus 1 infection
    607183 (LTA)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    607183 (LTA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cfa04052]
    607183 (LTA)
Cytokines and neuropeptides [BR:cfa04052]
 Cytokines
  Tumor necrosis fators
   607183 (LTA)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 607183
NCBI-ProteinID: NP_001300778
Ensembl: ENSCAFG00000000515
VGNC: 42852
UniProt: Q5WR07 A0A0U5J7M4
Position
12:1207912..1208854
AA seq 204 aa
MTPPGRLYLLRVRSAPVLLLLGLLLGLPPGAQGFPGVGISPSAARTAYQHPQKHFIQGTL
KPAAHLIGDPSIQNSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGEGCF
PKATPTPLYLAHEVQLFSSQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTQGDQL
STHTDGISHLLLSPSSVFFGAFAL
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacaccacctggaaggctctacctcctgagggtgcgcagcgcccccgtcctcctcctc
ctggggctgctgctgggactgccgcctggggcccaggggtttcctggtgtcggcatctca
ccctcggctgcccggactgcctaccagcaccctcagaagcacttcatacaaggcaccctc
aaacctgctgctcatcttattggagaccccagcatccagaactcgctgcgctggagagca
aacacggatcgtgccttcctccgccatggcttctctctgagcaacaattccctcctggtc
cccaccagtggcctctactttgtctactcccaggtggtcttctcaggggaaggctgcttc
cccaaggccacccccaccccactctacctggcccatgaggtccagctcttttcctcccag
taccccttccatgtgcctctcctcagtgctcagaagtctgtgtgcccagggccacaggga
ccttgggtgcgctctgtgtaccagggagctgtgttcctgcttacccagggagaccagcta
tccactcacaccgatggcatctcccacctactcctcagccccagtagtgtcttctttgga
gccttcgctctgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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