KEGG   Citrobacter farmeri: CI104_04875
Entry
CI104_04875       CDS       T05012                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
cfar  Citrobacter farmeri
Pathway
cfar00300  Lysine biosynthesis
cfar00550  Peptidoglycan biosynthesis
cfar01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CI104_04875
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CI104_04875
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfar01011]
    CI104_04875
Enzymes [BR:cfar01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     CI104_04875
Peptidoglycan biosynthesis and degradation proteins [BR:cfar01011]
 Precursor biosynthesis
  Amino acid ligase
   CI104_04875
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase GGDEF_2
Other DBs
NCBI-ProteinID: AST78464
Position
964637..966124
AA seq 495 aa
MADRNLRDLLAPWVSGLPARELREMTLDSRVAASGDLFVAVVGHQADGRRYIPQAIAQGV
AAIIAEAKDEATDGEVREMHGVPVIYLSQLNERLSALAGRFYHEPSENMRLVGVTGTNGK
TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQQALAGLVEQGATLC
AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLFSTHHCGQAIIN
ADDEVGRRWLANLPDAVAVSMEDHINPNCHGRWLKAVEVNYHDSGATIRFASSWGEGEIE
SHLMGAFNVSNLLLALATLLALGYPLADLLKTAAHLQPVCGRMEVFSAPGKTTVVVDYAH
TPDALEKALQAARLHCTGQLWCVFGCGGDRDKGKRPLMGAIAEEFADVVVVTDDNPRTEE
PRAIIDDILAGMLDAGRAKVMEGRAEAVTNAIMQAKDNDVVLVAGKGHEDYQIVGTQRLD
YSDRVTAARLLGVIA
NT seq 1488 nt   +upstreamnt  +downstreamnt
gtggcagatcgtaatttgcgcgaccttcttgctccgtgggtatcaggtttacctgcgcga
gaactgcgagagatgacactcgacagccgtgtggctgcgtcgggcgatctctttgtggca
gtggtaggtcatcaggcggacgggcgtcgatatatcccgcaggcgatagcgcaaggtgtg
gctgccattattgcagaggcgaaagatgaggcaaccgacggtgaagtgcgtgaaatgcac
ggcgtaccggttatttatctcagccagcttaacgagcgtttatctgcactggcgggccgc
ttttatcacgagccatctgaaaatatgcgtctggttggcgtaaccggtactaacggtaaa
accaccacgacgcaattactggcgcagtggagccaactgctcggcgaaaccagcgcagtg
atgggtacggtcggtaacggtctgctcggtaaagtgatcccaacggaaaataccaccggc
tcggctgttgacgtccagcaggcgctggcaggactggtcgaacagggcgctaccttatgc
gcgatggaagtctcttcccacggtctggtccagcatcgtgtcgcggcgctgaaattcgcc
gcctcggtgtttaccaatttaagccgcgaccatctggattatcacggcgatatggagcat
tacgaagccgcgaaatggctgctcttctctacgcaccattgcgggcaggcgattatcaac
gcggatgatgaagttggtcgccgctggttggcaaatctgccggatgccgtggccgtttcg
atggaagaccatatcaaccctaactgccacggccgctggctgaaggcggttgaggtgaat
tatcacgacagcggcgcgaccatccgctttgcctcaagctggggcgaaggggagattgaa
agccacctgatgggggcgtttaacgtcagcaatctgctgttggcgctggccacgctgctg
gcgctgggctatccactcgctgacctgctgaaaacggctgcacatctgcagccggtttgt
gggcgcatggaagtctttagcgcaccgggtaaaaccaccgtcgttgtcgactacgcccat
acccctgatgcgctggaaaaagcgttgcaggcggcgcgtctgcactgcaccgggcaactc
tggtgtgtctttggttgcggcggcgatcgtgacaaaggaaagcgcccgctgatgggagcg
attgccgaagagttcgctgacgtagtggtggtcacagacgacaacccgcgcactgaagaa
ccgcgcgccattatcgatgacattctggcgggcatgctggacgctggtcgggcaaaagtg
atggaaggccgcgcagaagcggtgaccaacgccattatgcaggcgaaagacaacgatgtg
gtgctggtggcgggcaaaggccacgaagattaccagattgtcggaactcagcgcctcgac
tattccgatcgcgtgactgcggcgcgtctgctgggagttatcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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