KEGG   Citrobacter farmeri: CI104_13685
Entry
CI104_13685       CDS       T05012                                 
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
  KO
K07347  outer membrane usher protein
Organism
cfar  Citrobacter farmeri
Pathway
cfar02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI104_13685
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cfar02000]
    CI104_13685
   02044 Secretion system [BR:cfar02044]
    CI104_13685
   02035 Bacterial motility proteins [BR:cfar02035]
    CI104_13685
Transporters [BR:cfar02000]
 Other transporters
  Pores ion channels [TC:1]
   CI104_13685
Secretion system [BR:cfar02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   CI104_13685
Bacterial motility proteins [BR:cfar02035]
 Pilus system
  Fimbrial proteins
   CI104_13685
SSDB
Motif
Pfam: Usher PapC_N PapC_C
Other DBs
NCBI-ProteinID: AST80051
Position
complement(2748850..2751465)
AA seq 871 aa
MRELKPESSAINSLQVMVRLLLTAGFISAGCALPGYALAESGFEEAFLLKDKNGVSPEVF
ITRNAVSPGLKQVDIRVNDQLAENWEVLFVVNKEQLTVPCLTYSQLKMLGLKVSLYEGWI
TRDRDSATTASDAEPQQCEDLLQRIPASLIRYDDASQVLQITVPQEAVDRQRFAMISPLE
WDEGVPSLRTAYRGYYYSSSLKGHSGNGGKTNDSTFRSAYISLNSVGTLGAWRFYSIDSF
YRNPGKGWDSNHDRSYIARDIAALRSQFQAGEIYSRTSGYMTGTVPVSGVSLATSERMLL
DNQFRYAPVIRGVARTNARLVVRQRGNIIYSNTLTPGPFAIDDLYSAQVGADLDVTVEES
DGQFQVFRVPYTALPNMIRPGAFRYSATAGKYRSQNAGTEEPLLATGSLEYGFEHFTLNS
SLLTSEDYQSLSTGLAWNIGNIGAFSTEVAYARHRETWNKDQSQEGSAVRFLYARYFDLT
ATSLQILGYQYRSKNYLDFSEFISRHSHTDIDGFEPGQSEWNRRKRSRVEMNVNQNLYDF
GNLYLSLSQDRFYGTGRKSTSISGGTGTTIGPASVSLSWTHTRDSSINDNILSLSVSLPL
GGYDERRSNYGSVNYGLTRDRDNRYSQSLGYSGSALDNAVSYSANVQRSSQGKYSESGSL
GYNGSMANLSGGVSHSSDYNQYSAGMSGGVTLYSGGAILSPALGDTIAIVETPGASGIGV
SGNNRARTDYFGHAVVTYLTPYRYNTVSLDTSGTENVELKESSRKVVPTPGAAVHLKFAT
RVGRRAMVEIRSARSVPLGAMVYLDGEKDEAGIVGNKGLTYLSGLDARQAQTLRVVWGEG
QNEHCTFTVPAATEEQRKPENWHHKIVVDCR
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgcgtgagttaaagccagagtcttctgccatcaacagcctgcaggtgatggtcaggttg
ttgttgacagcgggcttcatcagcgccggctgtgctctgcctggatatgcacttgccgaa
tctggttttgaagaagcttttctgctgaaggataaaaatggcgtgtcaccggaagtattt
atcacccgcaacgccgtgtctcccgggttaaagcaggtagatatccgggttaacgatcag
cttgcagaaaactgggaagtcctgtttgtggtgaacaaagagcaactgaccgtaccctgc
ctgacatattcacagctgaaaatgctgggactgaaggtcagcctttatgagggctggatc
acccgcgatcgggacagtgcgactaccgcgtctgacgctgaaccacagcagtgtgaagat
ctcctgcaacggataccggcgtctctcatccgttacgatgatgccagccaggttctgcaa
attactgtgcctcaggaagcggtcgacaggcagcgcttcgccatgatttctcccctcgaa
tgggacgaaggggtgcccagtctgcgtacggcttatcgggggtattactactcttccagc
ctcaaggggcattcaggtaatgggggaaaaacgaatgacagcacgttccgtagcgcctac
atcagcctgaacagcgtgggaacgctcggcgcatggcgtttttacagtatcgattccttc
taccggaatccgggaaagggctgggattcaaatcatgaccgaagctacattgcgcgggac
atcgcagcgctacgcagccagttccaggccggggaaatttactccagaacgtcaggctac
atgacaggaacggtgccggtcagcggtgtttcgctggctaccagtgagcgcatgctgctg
gacaaccagttccgttacgcgccggtgatccggggcgttgcgcggactaacgcccgtctg
gtggtccgccagcgggggaacatcatctacagtaacacgctgacccctgggccgtttgcc
attgatgacctgtacagtgcgcaggttggtgcggaccttgatgtcaccgtggaagaatct
gacggtcagttccaggtgttccgcgtcccctatacggcgctgccgaatatgatccgcccg
ggggcatttcgctacagcgccaccgcagggaaataccgtagtcagaatgccggaaccgaa
gagccactgctggccaccggcagtctggaatacggctttgagcatttcacgctcaacagt
tccctgttgacctcggaagattatcagtcgctgagtaccggactggcctggaatattggc
aatatcggcgctttctccacggaggttgcctatgcacgccaccgggaaacctggaataag
gaccagtcccaggaaggctcggcggtgcgttttctttatgcccgctattttgacctgacc
gccacctccctgcagattctgggctaccagtaccgttcgaagaattatctcgatttctcc
gaattcatctcgcggcacagccatactgacatcgacggctttgagccgggacagtcggaa
tggaatcgccgtaagcgcagccgggtggagatgaacgtcaaccagaatctgtacgatttt
ggcaacctgtatctgtccctgagccaggaccggttttacggtaccggccgtaaaagtacc
tcgataagcggtgggacaggaacgaccatcggcccggccagcgtgtcactctcctggacg
catacccgcgacagcagcatcaatgacaatattctgagcctgtccgtcagcctgccgctg
ggaggctacgatgagcggagaagtaactacggctcagtgaactacggacttacccgtgac
cgggataaccgttacagccagtcgctggggtattccggcagcgctctggacaatgccgtg
agctattccgccaacgtccagcgcagcagccaggggaaatacagcgagtccggctcgctg
gggtataacggcagtatggcgaatctcagcggcggcgtgagccacagcagcgattacaac
cagtattcagcggggatgagcgggggcgttacgctgtacagcggaggcgccattctctcc
ccggcgcttggcgatactatcgccattgtggaaacccccggggcatcaggaattggggtg
tcaggaaacaaccgcgcccggaccgattatttcggccatgccgtcgtgacgtatctcacg
ccttaccgctacaacaccgtcagcctggataccagcggaacggagaatgtggagctgaaa
gagtcctcccgcaaagtggtgccgaccccgggagcggcagttcaccttaaatttgcgacc
cgtgtagggcgccgggcgatggtggaaatccgtagtgccagatcggttccgctgggtgcc
atggtgtatctggatggagaaaaagatgaggccggcatcgtggggaataagggactgacc
tatctcagcggcctggatgcccgccaggcgcagacgcttcgcgtggtctggggagaagga
caaaacgaacactgcacgtttacggtacctgctgccactgaggagcagcgtaaaccggag
aactggcatcataagattgtggtggactgccggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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