KEGG T03077: CFNIH1

Citrobacter freundii: CFNIH1_01070

Entry

CFNIH1_01070      CDS       T03077

Symbol

recC

Name

(GenBank) exonuclease V subunit gamma

K03583

exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]

Organism

cfd Citrobacter freundii

Pathway

cfd03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:cfd00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CFNIH1_01070 (recC)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfd03400]
    CFNIH1_01070 (recC)
Enzymes [BR:cfd01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CFNIH1_01070 (recC)
DNA repair and recombination proteins [BR:cfd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CFNIH1_01070 (recC)

SSDB

Motif

Pfam:

Exonuc_V_gamma RecC_C NLE

Other DBs

NCBI-ProteinID:

AHY10159

Position

complement(223437..226808)

AA seq 1123 aa
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRNYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQIEGLGEAQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIHTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLLARQRRHSFEERHLPLFRDTQNAAGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELQSRAVAGVTLDEYSR
SDNKRLLDVNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEDGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASMSGKAHTDFVQPLPFEMPATLTLETLQRF
WAHPVRAFFQMRLQVNFRSEESEIPETEPFVLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGVLPYGSFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLICNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLAAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLEDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDAETLERIILQSQRYLLPIFRFNQSR

NT seq 3372 nt +upstreamnt +downstreamnt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggagtttatc
gttgagcgcgagcggttggacgatccctttgagccggaaatgatcctggtgcaaagcacc
ggtatggcgcagtggctacagatgacccttgcacagaaatttggtattgccgccaacatc
gatttcccgctacccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgtttagcaaacagagcatgagctggaagttaatgaccctgctgccg
caattgctggataacgatgacttcgcactgctgcgaaattatctgacggacgacaccgat
aaacgtaagctgtttcagctttcctctcgcgcggcggaccttttcgatcagtatttagtt
tatcgccctgactggttaacgcagtgggaagcggggcgccagattgaaggactcggcgag
gctcaggcatggcaggcgccgttgtggaaagcgctggtggaatacaccgcagaactgggt
caaccgcgctggcatcgcgccaatttatatcagcgatttattcacaccctggaaaatgcg
tctgaatgtccgcaggggctgccttctcgcgtctttatttgcggaatttcggcgctaccg
ccggtttacctgcaggccttgcaggcgttgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactattggggcgacattaaagatcccgcctggctggcaaagttg
ctggcgcgtcagcgtcggcacagttttgaagaacgtcacctgccgctgtttcgtgatact
cagaatgcggcaggattgtttaacagtgatggtgagcaggatgtaggcaacccgatgctg
gcctcgtggggtaagttgggacgtgattatatttatctgctttcagaactggaaaacagc
caggagctggatgcgtttgtcgatataaccccagacaatcttttgcataacattcagtcg
gatatcctcgagttacaaagccgggccgtggcgggcgttacgctggacgagtattcccgg
agcgacaacaaacgactgcttgatgtgaacgacaccagcgtgactttccatgtctgccat
agccctcagcgtgaagtggaaattcttcatgaccgactgctggcaatgctggaagcagat
cccacgctgacgccgcgcgacattatcgtgatggtggcggatatcgacagctatagcccg
ttcattcaggcggtttttggcagcgcgccagccgaccgttacttaccctatgcgatttcc
gaccgtcgggcgcgtcagtctcatcccgtcttgcaggcctttatcagtcttctgtcgctg
ccggatagccgttttgtctctgaggatgtgctggcattactggatgtccccgtgctggcg
gcacgtttcaatattgatgaagatggtctgcgctatcttcgtttgtgggttaatgaatca
ggtattcgctggggaattgacgacgataacgtgcgtgaactggaacttccgccaacgggt
caacatacctggcaatttggtttaacgcgcatgctgctcggctatgcgatggaaagcgcc
cagggcgagtggcaatcggtattgccctacgatgagtcgagcggtttgattgccgaactg
gtagggcatctggcctcgttactgatgcagcttaatctctggcgtcgaggactggcgcag
gagcgcccgctggaagagtggctgcctgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcggataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatt
actgaaggactgggggctgagtatggcgatgccgtaccgctttccttgctacgtgatgag
ctggcgcagcgtctcgaccaggaacgcattagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgctctattccttttaaggttgtatgcctgctgggcatg
aacgatggcgtttatccgcgtcagcttgcgccgctgggctttgatctgatgagtcaaaaa
ccgatgcggggcgatcgcagccgtcgcgatgatgaccgttatctgttcctcgaagcatta
atttcggcgcagcaaacgctctacatcagctacattggccgctcaattcaggataacagc
gaacgcttcccgtcggtattggtgcaggaactgatggattacatcgggcaaagccactat
ttgccgggcgacgaatcgttgacctgcgatcaaagcgaggcccgggtaaaagcgcacatt
acacgtctgcatacccgcatgccttttgacgcacaaaactatcagcccggcgaacagcaa
agctacgcccgggagtggctgcctgcggcgagcatgtcaggaaaagcgcatacggatttt
gtgcagcctctcccctttgaaatgccagccacgttaacgctggaaacgttacagcgattt
tgggctcatccggtacgggccttttttcagatgcgtttgcaggtcaactttcgttctgaa
gaaagtgagatcccggaaactgaaccttttgttctggaaggattaactcgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaacgatgctgaacgactgtttcgccgt
tttcgtgcggcaggcgtgctgccctatgggtcatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgtcgtcagccttgccagagc
atggagattgatctcatctgtaacggtgtgcaaatcaccggttggttgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcccagggggtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagtcggttgttcctg
cgcaaagacggggaatggcgtttcccgccactggcggcagaacaggcgctgctgtatttg
tcgcagctcattgagggatatcgggaaggcatgtcgtcgccattgctggtattaccggaa
agcggcggcgcatggataaaaacctgttatgacgctgcaaatgatgccatgttagaggac
gacgatacgctgcaaaaagcgcgcagtaagtttttgcaggcttatgaaggcaacatgatg
gttcgtggcgaaggcgatgatatctggtatcaacgcctgtggcgtcaactggatgccgag
acgctggaacgcattattttacagtcacagcgctatctgttaccgatttttcgctttaac
cagtcccgatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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