KEGG   Citrobacter freundii: CFNIH1_14020
Entry
CFNIH1_14020      CDS       T03077                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cfd  Citrobacter freundii
Pathway
cfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFNIH1_14020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfd03400]
    CFNIH1_14020
DNA repair and recombination proteins [BR:cfd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFNIH1_14020
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFNIH1_14020
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR SBDS_domain_II UB2H AAA_30 AAA_22 IF2_N DUF4686
Other DBs
NCBI-ProteinID: AHY12588
Position
2922026..2924047
AA seq 673 aa
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTISR
YTIYPKTHYVTPRERIVQAMEEIKVELADRRKNLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDDVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRTRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMARAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGKGKSRAGAKSDVVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAATIRD
QLHQLRELFIAAS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagtaaaccgttcaaactaaattccgcttttaaaccctctggcgatcagcctgaggcg
atacgtcgcctggaagaaggtctggaggacggtctggcgcatcagacgctgctgggggtg
acgggttcggggaaaacattcaccatcgcgaatgtgattgcggacctacagcgtcctacc
atggtgctggcgcctaacaagacgcttgccgcgcagctatatggcgagatgaaagagttc
tttccggaaaacgcggtggaatattttgtctcctactacgactattatcagccggaagct
tacgtaccgagttctgataccttcatcgagaaggatgcctcggtcaacgaacacattgag
cagatgcgtctgtcggcgaccaaagcgctactggaacgtcgggatgtcgttgtggtggcg
tcggtttccgccatttatggtttgggcgacccggacctgtatctgaaaatgatgctgcat
ctgacggtggggatgatcattgaccagcgcgcgatcctgcgtcgtctggcggagctgcaa
tatacccgtaacgatcaggcattccagcgcgggaccttccgcgtgcgcggtgaagttatc
gacattttcccggctgaatccgacgacattgcgctgcgcgtggaactgttcgatgaggaa
gtcgagcgtttgtcgctgtttgacccgcttaccgggcaggttgaatcgaccatttcccgc
tataccatctacccgaaaacgcactacgtcacgccgcgcgaacgtatcgtgcaggcgatg
gaagaaattaaagtcgagctggcagaccgccgtaaaaatctgctggcgaataacaagttg
ctggaagagcagcgcttaagccagcgtacacagttcgatctggaaatgatgaacgagctg
ggttattgctcggggattgaaaactattcccgctatctgtccggacgcggtccaggcgag
ccgccgccgacgttgtttgattacctgccggctgatggtctgctggtagtggatgaatcc
cacgtcactatcccgcaaattggcggtatgtaccgtggcgaccgggcgcgtaaagagacc
ctggtcgaatacggattccgtttgccctcggcgctggataaccgtccgcttaaatttgaa
gagttcgaggcactggctccgcagaccatctacgtctcggcgacgccggggaactatgag
ctggagaaatccggtgatgacgtggttgatcaggtagtacgaccgaccggcctgctggat
ccggtgatagaagtgcgtccggtggcgacgcaggttgacgatctgctgtcggagatccgc
acgcgtgcggcgattaacgaacgtgtgctggtcaccacgcttaccaaacgcatggcggaa
gacctcaccgaatacctcgaagagcacggcgagcgggtacgctatctgcactcagacatc
gataccgtggaacgtatggaaatcattcgtgacctgcgcctgggcgagtttgacgtgctg
gtgggtatcaacctgttacgtgaggggctggacatgcctgaggtctcgctggtggcaatt
ctggacgcagacaaagaagggttcctgcgctctgaacgctcacttatccagaccatcggt
cgcgcggcgcgtaacatcaacggcaaggctatactctacggcgataaaattaccgcctcg
atggccagggcgattggtgaaactgaacgtcgtcgcgagaagcagcagcgctataacgaa
gagcacggtattacgccgcaggggctgaacaagaaagtggtcgatattctggcgctgggt
cagaatattgcgaagaccaaggcgaagggcaaagggaagtcacgtgcgggtgcgaagtct
gacgttgttgaactggatatgacgccaaaagccctgcagcaaaagattcacgagttggaa
gggcagatgatgcagcatgcgcagaatctcgaatttgaagaggctgcgacgatccgcgac
cagttgcatcagctgcgcgagttatttattgcggcatcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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