KEGG T03077: CFNIH1

Citrobacter freundii: CFNIH1_21585

Entry

CFNIH1_21585      CDS       T03077

Name

(GenBank) 3-methyladenine DNA glycosylase

K01247

DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

cfd Citrobacter freundii

Pathway

cfd03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:cfd00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CFNIH1_21585
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfd03400]
    CFNIH1_21585
Enzymes [BR:cfd01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     CFNIH1_21585
DNA repair and recombination proteins [BR:cfd03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CFNIH1_21585

SSDB

Motif

Pfam:

AlkA_N HhH-GPD HHH_5

Other DBs

NCBI-ProteinID:

AHY14024

Position

complement(4417903..4418772)

AA seq 289 aa
MFTLSWQPPYDWPWMLGFLAARAVEGVETVGDLRYARSLTVGNHRGLVRVIPDLHTHQLY
VTLSPGLQPVAAECLAKMTRLFDLTCCPQQIVSALGSLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTAKVAHTYGDTLEDAPEYVCFPTPEALADADPLHLKALGMPLKRAE
ALIYLARATLDGTLATQAPADIEQGVKHLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFAGMTPAQIRRYAERWKPWRSYALLHIWYTDGWQPSVDGEITGIQ

NT seq 870 nt +upstreamnt +downstreamnt
atgttcacgctgagttggcaaccgccttatgactggccctggatgctggggttcctggcc
gcccgtgcggtggaaggggtagaaaccgtgggggatctgcgttatgccagaagcctgact
gtcgggaatcatcgtggtctggtgcgcgtgataccggatctacacacccatcaactatac
gtgacgttgagtccggggctacagccggttgccgcagagtgtctggctaaaatgacgcgc
ttattcgatcttacctgttgcccgcagcaaatcgtcagcgcgctgggaagccttggggca
gcgcgtccgggactgcgtttgccgggcagtgttgatgcgtttgaacaaggagtacgggcg
attttagggcagttagtcagcgtagctatggcggcgaaactgacggcgaaagtggcgcat
acttatggggacacgctggaggatgcgccagagtatgtgtgttttcccacccctgaagcg
ctcgctgatgccgatccattacacctgaaagcgttagggatgccgctcaaacgcgctgaa
gcgttaatttatctggctcgcgcgacgctggatggaacgcttgcgacacaagcgcctgcc
gatatcgagcaaggcgtcaaacatctgcaaactttccccggcatagggcgctggactgcc
aactactttgcgctgcgcggctggcaggcgaaagatgtttttctgccggatgactatctc
attaaacaacgttttgccggcatgacgcccgcccagattcggcggtatgcagagcgctgg
aagccctggcgctcctatgcgttattacatatctggtatacggatggctggcagccgtca
gttgatggcgaaattactggtattcagtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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