KEGG   Campylobacter fetus subsp. fetus 82-40: CFF8240_1257
Entry
CFF8240_1257      CDS       T00430                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cff  Campylobacter fetus subsp. fetus 82-40
Pathway
cff03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cff00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFF8240_1257
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cff03019]
    CFF8240_1257
   03016 Transfer RNA biogenesis [BR:cff03016]
    CFF8240_1257
Enzymes [BR:cff01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CFF8240_1257
Messenger RNA biogenesis [BR:cff03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CFF8240_1257
Transfer RNA biogenesis [BR:cff03016]
 Prokaryotic type
  tRNA degradation factors
   CFF8240_1257
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 S1_2 HI0933_like
Other DBs
NCBI-ProteinID: ABK82230
UniProt: A0RQD0
Position
complement(1246332..1248518)
AA seq 728 aa
MQCSIEVNNQIEIFDLNKVAKQAAGAVLMRVKNTVVLAAVAREDAQVEEDFLPLTVQYIE
KQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSSDPEVD
LQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINPSNSELKNSALDLYVAGVKDE
LLMIEMRSLPNEQNEIVPVIAIDPMMDPSLNEGFVSRQKMNEFSEDLMIDAIKLATEAIL
KGSNAYEEAFRNYKKETANLEYKPEIENENVAIYINEFYKEDVKAAINQMAKSERASELS
KIAKQIALSEVAQKEGWDEALISNILGKYKKKLVRTGIIKDKKRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVTTLGTDNDAQMSEYLTEKNAVADKFMFNYNFPGFSVGE
ASPLKAPGRRELGHGNLAKRALYPSIDLNSPYSLRVVSEILESNGSSSMASVCGGSLSLR
AAGVETIKLVAGVAMGLVFEGDEHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISLDVLKEALYQAKEARDHILNLMVKADEEIVVNEDVLPKLELFSVDPSKIVDIIGQA
GKTIKEIIEKFEVSIDLDRDKGEVKIAGGERQKVEAAKDYIIQITQKEQRSGGFRNKREY
KNVTPFNIGDEFEGEIKKMAAFGAFISLRDGVDGLLHISKIVSPLKEGDTIKVKVSDIKG
GKISLDLN
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgcagtgttcaatagaagtaaataatcaaattgaaatttttgatcttaataaggttgcc
aaacaagcagccggcgcagtgttaatgcgtgtaaaaaatacagttgtattagccgcggtt
gctagagaagatgctcaagtagaagaggattttttacctcttaccgtgcagtatatagaa
aaacaatacgccgctggtagaataccaggaggatatgtcaaaagagagactaaaccagga
gattttgagacattaacaagccgtattatagatagaagtttaagacctttattccctaaa
ggctatgcatatccgactcagattgtcgtaatggttttaagtagcgatccagaagtggat
ttgcaagtagtgtcgctaaatgctgcgagtgtagctttatatcttagtgatattccggtt
aacagtccggtttgcggtgttagggtagggcatataaacggtaaatttgttataaatcca
agcaattcagagctaaaaaactctgctcttgatctttacgtggcaggcgtaaaagatgaa
cttcttatgatagaaatgagaagtttacccaatgaacaaaatgaaattgtaccagtcatc
gctatagatcctatgatggatcctagtttaaatgaaggtttcgtttcaagacaaaaaatg
aatgaatttagtgaagatcttatgatagatgctataaaattagctacagaagctatatta
aaaggaagcaacgcatatgaagaggcgtttcgtaactacaaaaaagagactgcaaattta
gagtacaagccagagatagaaaatgaaaatgttgcgatatatataaatgaattttacaaa
gaagatgtaaaagcggctataaatcaaatggctaaaagcgaaagagcgagtgagctttct
aaaatagctaaacaaatagctcttagtgaagttgctcaaaaagagggctgggatgaagct
cttatctcgaatatacttggaaaatataagaaaaagttagttagaacaggtattataaaa
gataaaaaaagagccgacggaagaggtctaaaagatgttaggccgatcagtatagagacg
aatattttgccaaatgcacatggaagttgtctatttacccgcggtcaaactcaagctctt
gttgtaactactttaggtaccgataatgatgctcaaatgagtgagtacttgacagaaaaa
aatgcagttgccgataaatttatgtttaattataattttcctggatttagcgtaggtgag
gcaagtcctttaaaggctcctggacgacgcgagttaggacatggaaatttagcaaaaaga
gctctttatccaagtatagatttaaatagtccgtactcgttaagagttgttagcgaaatt
ttagaaagtaacggttcaagttctatggctagtgtatgtggcggctctttgtcacttaga
gcagcaggagtcgaaacgatcaagcttgtagccggagtagcgatggggcttgtatttgaa
ggtgatgagcacgctgttttaacagatataatggggcttgaagaccacgatggagatatg
gacttcaaggtcgcaggctcaaaagacggcatcaccgctcttcagatggatatcaaatta
ggcggaattagtttagatgtattaaaagaagcgctataccaagcaaaagaagctagagat
catattttaaatttaatggttaaagcagatgaagaaatagtcgtgaatgaggatgtttta
ccaaagttagagttatttagcgtagatcctagtaaaatagttgatataataggacaggcc
ggaaaaaccataaaagagattatagaaaaatttgaagttagcatagatcttgacagagat
aaaggcgaagtaaagatagccgggggagagagacaaaaggtagaagctgctaaagattat
attatacaaattacgcaaaaagagcagagaagcggcggttttaggaacaaaagagagtat
aaaaacgtaactccttttaacataggtgatgagtttgaaggcgaaattaaaaaaatggct
gcttttggtgcatttatatctttaagagatggagttgacgggcttttacatatttcaaaa
atagtttcacctttaaaagagggtgatacgataaaggtaaaagtttcagatattaaaggc
ggaaaaatatcattggatcttaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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