KEGG   Caulobacter flavus: C1707_14225
Entry
C1707_14225       CDS       T05702                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cfh  Caulobacter flavus
Pathway
cfh03030  DNA replication
cfh03410  Base excision repair
cfh03420  Nucleotide excision repair
cfh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C1707_14225
   03410 Base excision repair
    C1707_14225
   03420 Nucleotide excision repair
    C1707_14225
   03430 Mismatch repair
    C1707_14225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfh03032]
    C1707_14225
   03400 DNA repair and recombination proteins [BR:cfh03400]
    C1707_14225
Enzymes [BR:cfh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C1707_14225
DNA replication proteins [BR:cfh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C1707_14225
DNA repair and recombination proteins [BR:cfh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C1707_14225
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C1707_14225
   MMR (mismatch excision repair)
    DNA ligase
     C1707_14225
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C1707_14225
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT GT4-conflict Bep_C_terminal
Other DBs
NCBI-ProteinID: AYV47323
UniProt: A0A2N5CXM4
Position
complement(3083249..3085600)
AA seq 783 aa
MSQISVADLTEAQAVEELERLADEMAGHDLRYYQDDAPTVSDAEYDELKRRNADIEARFP
HLQRENSPSLKVGAARSAQFSPVEHGVPMLSLDNAFSNDEAEEFDARIRRFLRLGADEPV
FYMAEPKIDGLSASLRYEKGVLVQGATRGDGRVGEDVTANLRTIADIPHRLKGSGWPDVI
EIRGEVYVELEAFAAFNKAAEEAGSRTYANPRNFAAGSLRQIDPKISATRPLRFFGYAWG
LVSEPFAASQSEALEKLEAWGFVTTAPPAERVQGAQGLLDIYARFETLRPQLPFDIDGVV
YKVDDLERQRRLGFVSRSPRWAIARKFPAQRARTILEAIDIQVGRTGAHTPVARLHPVTV
GGVSVTNATLHNADEIARLDARIGDTVVLQRAGDVIPQIVEVDLAARPEGAEPYAFPHVC
ECPLKTALAQEINANGVESVVRRCTGEFACPFQRVEHLRHFVSRRAFDIEGLGEKQLQAF
FDEGWINEPADIFRLARDEEKLAALRERDGYGETSVKNLVAGIDARRSIGLDRMIYGLGA
RDIGETTSTVLARHFDQFADLQAASEAAARGLPGATYLELSTAAGVGPKALDLLVEAGRA
GVPADPWPQSEDLELKIGQVVPKLTKPARAALAQRYGTWEAFAEGLAQAAKGAPGEDYLT
LAAVDGVGPVAAQSLARFFAEEHNRQKVENLLAELDVQAVAKPKTDTAVAGKTVVFTGSL
EKMTRDEAKAQAEALGAKVASSVSKKTHLVVYGPGAGSKLKTAQELNIDMMDEDQWLALV
ASL
NT seq 2352 nt   +upstreamnt  +downstreamnt
gtgtcccagatctccgtcgccgacctcaccgaagcccaagccgtcgaggagctcgaacgt
ctcgccgacgagatggccggccacgacctgcgctactatcaggacgacgcccccacggtc
agcgacgccgagtacgacgaactcaagcgccgcaacgccgacatcgaggcccgcttcccg
cacctgcagcgcgagaactcgccgtcgctgaaggtcggcgccgcacgctcggcccagttc
tcgccggtcgagcacggcgtgccgatgctcagcctcgacaacgccttctccaacgacgag
gccgaggagttcgacgcccgcatccgccgcttcctgcgcctgggcgccgacgagccggtc
ttctacatggccgagcccaagatcgacggcctgtcggcctcgctgcgctacgaaaagggc
gtgctggtccagggcgcgacgcgcggcgacggccgcgtgggcgaggacgtcaccgccaac
ctgcggaccatcgccgacattccccaccgcctgaagggctccggctggcccgacgtcatc
gagatccgcggcgaggtctatgtcgagctcgaggccttcgccgccttcaacaaggccgcc
gaggaggccggctcgcgcacctacgccaacccgcgcaacttcgccgccggctcgctgcgc
cagatcgaccccaagatcagcgccacccggccccttcgcttcttcggctacgcctggggc
ctggtctccgagcccttcgccgccagccagtccgaggcgctggagaagctggaggcctgg
ggcttcgtcaccaccgcaccgccggccgaacgggtgcaaggcgcccagggcctgctcgac
atctacgcccgcttcgagaccctgcgcccgcaattgccgtttgacatcgacggcgtcgtc
tacaaggtcgacgacctggagcggcagcgccgcctgggcttcgtctcgcgctcgccccgc
tgggccatcgcccgcaagttcccggcccagcgcgcccgcacgatcctcgaagccatcgac
atccaggtcggccgcaccggcgcccatacgcccgtcgcgcgtctgcaccccgtcaccgtc
ggcggcgtctcggtgaccaacgccaccctgcacaacgccgacgagatcgcccgcctcgac
gcccgcatcggcgacacggtggtgctgcagcgcgccggcgacgtgatcccgcagatcgtc
gaggtcgacctggccgcgcgtccggaaggcgccgagccctacgcgttcccgcacgtctgc
gaatgcccgctgaagacggcgctggcccaggagatcaacgccaacggcgtggagtcggtc
gtgcgccgctgcaccggcgagttcgcctgcccgttccagcgcgtcgagcacctgcgccac
ttcgtctcccgccgcgccttcgacatcgagggcctgggcgaaaagcagctgcaggccttc
ttcgacgagggctggatcaacgagccggccgacatcttccgcctggcccgcgacgaggag
aagctggccgccctgcgcgagcgcgacggctatggcgagacctcggtcaagaacctggtc
gccggcatcgacgcccgtcgcagcatcggcctggaccggatgatctacggcctgggcgcc
cgcgacatcggcgagaccacctcgaccgtcctggcccgccacttcgaccagttcgccgac
ctgcaggccgcctccgaagccgccgccaggggcctgccgggcgcgacctatctggagctg
tcgacggccgccggcgtcgggcccaaggcgctcgatctcctcgtggaggccggccgcgcc
ggcgtgcccgccgatccctggccgcagtccgaggatctggagcttaagatcggccaggtg
gttcccaagctgaccaaaccggcccgcgcggccctggcccagcgctacggaacctgggag
gccttcgccgaaggcctggcgcaggccgccaagggcgcgccgggcgaggactacctgacc
ctggcggccgtcgacggcgtcggccccgtggccgcccagtcgctggcccgcttcttcgcc
gaggaacacaaccgccagaaagtcgagaacctgttggcggagctcgacgtccaggccgtg
gccaagcccaagaccgacaccgccgtggccggcaagaccgtggtcttcaccggctcgctg
gagaagatgacccgcgacgaagccaaggcccaggccgaagccctgggcgccaaggtcgcc
tcgtcagtgtccaagaaaactcatctcgtcgtctatggcccaggcgcgggctcgaagctc
aagaccgcccaggagctcaacatcgatatgatggacgaggatcaatggctggccctggtc
gccagcctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system