KEGG   Colletotrichum fioriniae: CFIO01_07558
Entry
CFIO01_07558      CDS       T04796                                 
Name
(GenBank) DNA polymerase family B
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03030  DNA replication
cfj03410  Base excision repair
cfj03420  Nucleotide excision repair
cfj03430  Mismatch repair
cfj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFIO01_07558
   03410 Base excision repair
    CFIO01_07558
   03420 Nucleotide excision repair
    CFIO01_07558
   03430 Mismatch repair
    CFIO01_07558
   03440 Homologous recombination
    CFIO01_07558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfj03032]
    CFIO01_07558
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_07558
Enzymes [BR:cfj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CFIO01_07558
DNA replication proteins [BR:cfj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    CFIO01_07558
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      CFIO01_07558
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     CFIO01_07558
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 DUF1948 C1_1
Other DBs
NCBI-ProteinID: EXF75235
UniProt: A0A010QEL6
AA seq 1103 aa
MATVLPQKRVLGETPSTRRNIPSTPLSLKKRKVEGFSSSPARHVGSQKNAKNLPGSSQPK
SAFESEVLEKLSQDISELKQNNTEKDQAWERPPLVDFNPARDNLTFQQIEAEEGSLHGGR
ATVKLFGVTEQGHSVMLHVTDFKHYLYVAAPVAFRPEDCNAFKAYLESQVAQHQPCIHSV
AFLMRENIYGFQGNVKSPYLKVTVMDPKFIARVRTTIESGNANWKGLWKGMDGGIMTFDN
IQYVLRFMVDCKIFGMSWVEAPASKYQVLHQSQRQSNCQIEAEINYLDLIAHKPVGEWSK
MAPLRIMSFDIECAGRKGIFPEATHDPVIQIANVVTRYGEKKPFVRNVFCLDTTSPIVAT
QILEFEKEEKMLSEWQKFLIKVDPDIIIGYNIANFDFPYLLDRAKALKVGGFEYWSRIPS
IPSRAKETNFSSKQMGNRDSKATNTNGRLQLDLLQLVQRDHHLRSYTLNSVCSQFLGEQK
EDVHYTMITELFNGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGIPFNFL
LSRGQQVKFISQLFRKALEQKLVIPNMRSEGSDEQYEGATVIEPTRGYYDVPIATLDFAS
LYPSIMQAHNLCYTTLVNKKAIEKFDLKKDDDYIVTPNGDTFVTIKQRKGLLAQILEELL
TARKQAKRELAGETDPFKKAVLNGRQLALKISANSVYGLTGATTGKLPCLEIASSTTAFG
RQMIMKTKEEVEKKYCIANGYTHDAQVIYGDTDSVMVKFGTKDLPEAMKFGEEAASFVSS
KFVKPIKLEFEKVYYPYLLINKKRYAGLYWTNPNKYDKMDTKGIETVRRDNCLLVQTVIE
KVLRMMLIDQDVQGAQDYVKDTIADLLQNKVDMSKLVITKALTKDDYAAKQAHVELAQRM
KKRDAGSAPGLGDRVAYVMIKGAAGAKNYEKSEDPIYVLENNVPIDTRYYLDNQLAKPLG
RIFEPILGETKANSLLTGAHTRTIAVSAPAVGGLMKFAKKTQTCMGCKKPLRGKEESAGA
VCSDCAPRVGELYKKTLDKTSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIFYMRMK
AKKDLEDAGKELKRFDFDQAAIW
NT seq 3312 nt   +upstreamnt  +downstreamnt
atggctacagtgctgcctcaaaagcgtgtgcttggggagacaccaagcacccgccgcaac
atcccgtcgacgccattgtccctcaagaaacgcaaagtcgaagggttctcgtcctcaccc
gcccgccatgtcgggtcccagaagaatgcgaagaacctcccgggctctagtcaacccaag
agcgccttcgaatcagaagtcctcgagaagttgagccaggatatctctgaactcaagcag
aacaataccgaaaaggatcaagcatgggagcgacctccgcttgtcgacttcaacccggcc
agggacaacctgaccttccagcaaatcgaggccgaggagggcagtttacatggcggtcga
gcaacagttaagctgtttggtgttaccgagcaaggccactcagtgatgttgcatgtcacg
gacttcaaacactacctctacgtcgctgccccggtggcgtttcgacccgaggactgcaat
gccttcaaggcctatctcgagtcacaagtagcacagcaccagccttgtatccactcagtg
gctttcctgatgagggaaaacatttatggcttccaaggaaatgtcaagagcccctacctc
aaggtcactgtcatggaccctaagttcatcgccagagttcggacaacgatcgagtcgggc
aatgccaactggaagggtctgtggaagggcatggatggtggcatcatgacatttgacaac
attcaatacgtcctccgtttcatggttgactgcaagattttcggaatgtcttgggttgaa
gcccctgcatcaaaataccaggtcttacaccagtctcaacgacaatcgaactgccaaatc
gaagccgagatcaattacctcgacctaatcgctcacaagccggtgggagaatggtccaag
atggctcctctgagaatcatgtcgttcgatatcgagtgcgctggacgtaagggcatcttc
ccagaggcgacacacgaccccgtcatccagattgcgaacgttgtgacaagatacggagag
aagaaacccttcgtgcggaatgtgttctgcttagacacaaccagtcccatcgtcgccacg
cagattctcgagtttgaaaaggaggagaagatgctcagcgagtggcagaagttcctcatc
aaagtcgacccagatatcattatcggatacaacattgccaactttgattttccatacctt
ctcgacagagcgaaagcattgaaggttggaggattcgagtactggtctcgaatccctagc
atcccttccagagccaaggagacgaacttctccagtaagcagatgggtaaccgcgacagc
aaggctaccaacaccaacggacggttgcaactcgacttactgcagcttgttcaacgcgac
caccaccttcgaagttacacgctcaactctgtgtgctcccaatttttgggagagcaaaag
gaggatgtccactacaccatgatcacagagttgttcaacggtacccccgagtcacgccga
cgtctcgccctctactgtctgaaggacgcatacctcccgcagcggctcatggacaagcta
tcttgtcttgaaaactacactgagatggcgagagtcacgggtatcccgttcaactttctg
ctctccagaggacagcaggttaaattcatcagtcagcttttccgaaaagccctcgagcaa
aagctggttattcccaatatgaggtctgagggtagcgatgagcagtatgaaggtgccacg
gtcatcgagccgacccgaggatactacgacgtgcctatcgcaaccctcgattttgcttca
ctgtacccgagtatcatgcaggcccacaacctatgctatacaacgctggtcaacaagaag
gccatcgaaaagtttgatctgaagaaggacgatgactacatcgtcaccccgaacggcgac
acctttgttaccatcaaacaaaggaagggtcttcttgctcagattctcgaggaacttttg
actgcaagaaagcaggccaagcgtgaattagctggagaaacagatcctttcaagaaggca
gtgctgaacggtcgacaactggctttaaagatcagtgcaaactccgtctacggactcacg
ggtgcgacgactggcaagctgccttgtcttgagatcgccagtagcacaacagcctttggt
cgacagatgattatgaagaccaaggaggaggttgagaagaagtactgtattgccaatgga
tacacacatgacgctcaggtcatttatggtgacactgactctgtcatggtcaagtttggc
accaaggaccttcccgaggccatgaagtttggcgaagaagctgctagcttcgtctcctcc
aagttcgtcaagccgatcaagttggagttcgaaaaggtgtactacccatacctgcttatc
aacaagaaacggtacgctggcctatactggacaaatcccaataagtacgacaagatggat
acgaagggtattgagacggttcgacgagacaattgtctgcttgtacaaaccgtcattgag
aaggtgcttcgaatgatgctcatcgatcaagatgtccagggagcgcaagactacgtcaaa
gacacgattgcggacttgttgcaaaacaaggttgatatgtcgaagttggtcattacgaag
gcgctcaccaaagacgattacgcagccaaacaggctcatgttgagctggctcagagaatg
aagaagcgcgatgcaggctcggcaccaggtctaggtgatcgagttgcctacgtgatgatc
aagggtgcggcaggcgcaaagaactacgagaaatccgaggatcccatctacgtccttgag
aacaacgtaccgatcgacacgcgctactacctcgataatcagctcgcgaagcctttgggc
agaatcttcgagcccattctgggtgagaccaaggcgaactcgctgcttacgggagcgcat
acgcgcacgattgcagtgtcggcgccggccgtcggaggtctgatgaagtttgcaaagaag
acgcaaacatgcatgggatgcaagaaaccactccgaggcaaggaggagagcgcgggggca
gtgtgctcggattgcgcgcctcgggtcggcgaattgtataagaagaccctggacaagacg
tcggatctcgaggtgcggttcggccggctctggacgcagtgccagcggtgtcagggcagc
atgcactgcgaagtgatttgtagtagcaaggactgccccatcttctacatgcgtatgaag
gcgaagaaggacttggaggatgcagggaaggagctgaagaggttcgactttgaccaggcg
gccatctggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system