KEGG   Colletotrichum fioriniae: CFIO01_12874
Entry
CFIO01_12874      CDS       T04796                                 
Name
(GenBank) RNA polymerase Rpb3/RpoA insert domain-containing protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cfj  Colletotrichum fioriniae
Pathway
cfj03020  RNA polymerase
cfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CFIO01_12874
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFIO01_12874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfj03021]
    CFIO01_12874
   03400 DNA repair and recombination proteins [BR:cfj03400]
    CFIO01_12874
Transcription machinery [BR:cfj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CFIO01_12874
DNA repair and recombination proteins [BR:cfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CFIO01_12874
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L PriA_CRR
Other DBs
NCBI-ProteinID: EXF85604
UniProt: A0A010S4L8
AA seq 339 aa
MDYEPMLLDGESGGPSIKISGADNIHVNFDLSNCDLSFANSLRRVIQAEVPVIAIDLVEI
EANTSVLADEFIAHRLGLIPLQSKDVNSLLYTRDCDCEQYCDNCSVKLTLHARCSSDETM
KVYASDLIVDSFRQNGTVGNPVILDPEGQGSLIAKLRKGQELKVSCIAKKGIAKEHAKWM
PTSAVGFEYDPHNKLHHLDMWFEEDAKAEWPESKYAKMEDPPQEGEAFDYDALPGKFYFE
VEGVGSLEPDQIIQEGIKILQEKLALTLHILTGEADDDGMGDFDGPRSPNLDMDGGNPWQ
DQGYTTPFNGGNQTAWGGNATTPYTTTTPYGASGQSGWN
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggattacgagccgatgctgttggatggcgagtccggaggaccatcgatcaagatctca
ggggctgataacatccacgtcaactttgatctctcgaactgcgacctctccttcgccaac
tcgctgcgtcgcgttatccaggccgaagtcccagtgatcgccatcgacctggtcgaaatc
gaggccaacacatctgtcctcgccgatgagttcatcgcccatcgcctgggtctaattccc
ctccagtccaaggacgtcaacagcttgctttacacccgagactgcgactgcgagcagtat
tgcgacaactgcagcgtaaagctcacgctgcatgcgcgatgctcgtcagacgagaccatg
aaggtctacgctagcgatcttattgtcgacagctttaggcagaacggcacggtgggaaac
cctgtaatcctcgaccctgaaggacaaggctctttgattgccaagctgcgcaaagggcag
gagcttaaggtgtcatgcatcgcgaagaagggtattgcaaaggagcatgcaaaatggatg
ccgacgtcggccgttgggtttgaatacgaccctcacaacaagctgcaccacctggacatg
tggttcgaagaagatgccaaggccgaatggcctgagagcaaatatgccaagatggaggat
cccccacaagaaggcgaagccttcgactacgacgcgctccccggcaagttctactttgag
gtcgaaggtgtaggcagtctggagccggatcagattatccaagaaggaatcaagattttg
caggagaagttggctctcacgctccacattctcacaggtgaagcagatgacgatggcatg
ggcgactttgatggacctcgcagtcccaacttggacatggacggcggcaacccctggcaa
gatcaaggctacaccactcctttcaacggcggcaaccagactgcgtggggaggcaacgca
acgacaccctacaccacaacgacaccttacggcgcctccggacagtctggatggaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system