KEGG T01230: Cfla

Cellulomonas flavigena: Cfla_1726

Entry

Cfla_1726         CDS       T01230

Name

(GenBank) 3'-5' exonuclease

K03684

ribonuclease D [EC:3.1.13.5]

Organism

cfl Cellulomonas flavigena

Brite

KEGG Orthology (KO) [BR:cfl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cfl03016]
    Cfla_1726
Enzymes [BR:cfl01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Cfla_1726
Transfer RNA biogenesis [BR:cfl03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Cfla_1726

SSDB

Motif

Pfam:

DNA_pol_A_exo1 DNA_pol_A_exoN HRDC

Other DBs

NCBI-ProteinID:

ADG74623

UniProt:

D5UEG3

Position

complement(1920915..1922168)

AA seq 417 aa
MEVEASQGGPGADEQPEAPAVVPLLEPADGIPEVVATPEALAATVAAFAAGTGPVAVDAE
RASGYRYGQRTYLVQLRREDAGTALIDPVALPDLSTLSAALVGVEWVLHAASQDLPGLAE
QGMRPSRVFDTELAARLLGMERVGLAAVVADTLGLGLAKEHSAVDWSTRPLPTEWLRYAA
LDVEVLVEVRQVLAERLAVSGKAEWARQEFEAVRTAPPPAPRAEPWRRVSGLHNVRDARR
LAVVRELYATRDRNARERDISPGRVLPDAAIVAAAQALPRTVGQLTALPAFMGKGTRRRA
ALWQSAIDRAVALPDAELPATRGPASDGPPPARVWGDRDPAAARRLAAARTLVAGLSQEH
DVPVENLVQPDLLRRICWSPPAPLDEAHVGVAMAAGGARPWQVELLAGRLAAALSAA

NT seq 1254 nt +upstreamnt +downstreamnt
atggaggtcgaggcgtcgcagggcggcccgggcgcggacgagcagcccgaggcgccggcc
gtcgtccccctgctcgagccggccgacgggatccccgaggtcgtcgcgacaccggaggcc
ctcgccgcgaccgtagcggcgttcgcagcgggcacgggcccggtcgcggtcgacgccgag
cgagcctccggctaccgctacggccagcgcacgtacctcgtgcagctgcggcgcgaggac
gcgggcacggcgctgatcgacccggtcgcgctgcccgacctgtcgaccctgtcggcggcg
ctcgtcggtgtggaatgggtgctgcacgcggcgtcccaggacctccccggtctcgccgag
caggggatgcggccgtcgcgcgtcttcgacaccgagctcgccgcacgcctgctcggcatg
gagcgggtcgggctggccgccgtcgtcgcggacaccctcgggctcgggctggccaaggag
cactcggccgtggactggtcgacgcgtccgctgccgacggagtggctgcggtacgccgca
ctcgacgtcgaggtgctcgtcgaggtgcggcaggtgctcgccgagcggctcgcggtgtcg
ggcaaggccgagtgggcgcggcaggagttcgaggccgtgcgcaccgccccgccgccggca
ccgcgggccgagccctggcgtcgcgtctcgggtctgcacaacgtccgcgacgcccgccgc
ctggccgtcgtgcgcgagctgtacgcgacgcgcgaccgcaacgcgcgcgagcgtgacatc
tcccccggccgggtgctgccggacgccgcgatcgtcgccgccgcccaggcgctgccgcgc
acggtcggccagctcaccgcgctgcccgcgttcatgggcaagggcacgcgtcggcgcgcg
gcactgtggcagtccgcgatcgaccgggccgtggcgctgccggacgcggagctgcccgcc
acgcgcggccctgcgagtgacggtccgcctcccgcccgggtgtggggcgaccgcgaccct
gccgcggcgcgccgcctggctgccgcgcgcacgctcgtcgcggggctgtcgcaggagcac
gacgtgcccgtcgagaacctcgtccagccggacctgctgcgtcggatctgctggtcgcca
ccggcgcccctcgacgaggcgcacgtcggtgtcgcgatggcggccgggggcgctcggccg
tggcaggtcgagctgctggccgggcggctggccgcggcgctctccgccgcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system