KEGG   Clostridium formicaceticum: BJL90_15730
Entry
BJL90_15730       CDS       T05005                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cfm  Clostridium formicaceticum
Pathway
cfm02024  Quorum sensing
cfm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJL90_15730
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BJL90_15730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfm03019]
    BJL90_15730
   03036 Chromosome and associated proteins [BR:cfm03036]
    BJL90_15730
Messenger RNA biogenesis [BR:cfm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BJL90_15730
Chromosome and associated proteins [BR:cfm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BJL90_15730
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AOY77170
UniProt: A0A1D9FPQ6
Position
complement(3404234..3404467)
AA seq 77 aa
MKNNINLQDIFLNQVRKESLPITIYLVNGFQLKGLVKGFDNYTIVLDTDGKQQLIYKHAI
STIAPSSNINFMQNTKQ
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaaaataatattaacttacaagatatctttttgaatcaagtaagaaaagaaagtctt
ccaataactatatatttagtgaatggatttcaactaaaaggtttggtaaagggctttgat
aactatacgattgtcttagatactgatggtaaacagcaattgatttacaaacatgctatt
tcaacaattgctcccagcagcaacatcaactttatgcaaaatactaagcaataa

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