KEGG T03037: CFAL

Corynebacterium falsenii: CFAL_04785

Entry

CFAL_04785        CDS       T03037

Name

(GenBank) excinuclease ABC subunit A

K03701

excinuclease ABC subunit A

Organism

cfn Corynebacterium falsenii

Pathway

cfn03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:cfn00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFAL_04785
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfn03400]
    CFAL_04785
DNA repair and recombination proteins [BR:cfn03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFAL_04785
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFAL_04785

SSDB

Motif

Pfam:

UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 RsgA_GTPase nSTAND1 AAA_23 AAA_16 DnaJ_CXXCXGXG APS_kinase RACo_linker CCDC24 cobW

Other DBs

NCBI-ProteinID:

AHI03001

Position

1093005..1095851

AA seq 948 aa
MADTLVVRGAREHNLKGVDIDLPRDKMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGRMDKPDVDLIEGLSPAVSIDQKSTNRNPRSTVGTVTEIFDYLRLLYARTGVPH
CPECGEVIQRQTPQEIVDQILAMEQGLKFQVLAPVVRTRKGEFVDLFEDLASQGYSRVMV
DGEVHQLSNPPKLEKQVKHDIDVVVDRLQVKPTQKQRLTDSVETALNLADGIVVLDFVGL
GDDDPNRTRRFSEKMACPNGHPITLDELEPRTFSFNSPYGACPACDGLGTRLEVDEKLVI
PDEDAPLIHAIAPWASSPNSKYFVKLLTALSEQLGIEATTPWSKLTKTQRKAVLHGHSAT
IKVSYRNRYGRARNYSAPFEGVMPFLTRKMDQTDSDWAKDRYRSYMREVACPTCNGTRLK
PEVLAVTIASGKKELSIAEVSDLSIADASEFLDNLTLTKRQEMIAGAVLREIQARLKFLL
DVGLNYLSMSRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNERLIRTL
EHLRDLGNTLIVVEHDEDTIRTADWLVDIGPRAGEYGGEVVYQGEPQGIYDVEESLTGNY
LSGARVLAVPESRRPVDKKRMLTVHGAQENNLKNVDVNIPLGVLTCITGVSGSGKSSLIN
GILARSLANTLNGARLVPGHHKKISGTEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKIR
KLFAETTEAKVRGYTAGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVPCEVCHGARYN
RETLEVHYKGKNISEVLDMPITEAAEFFAPVTSISRYLDTLVDVGLGYVRLGQSATTLSG
GEAQRVKLAAELQKRSNGRTIYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVLIIEHNL
DVIKAADWIVDMGPEGGSGGGTVVAEGTPEQIAKVKESHTGRYLASLV

NT seq 2847 nt +upstreamnt +downstreamnt
gtggctgacacgctggtcgtccgcggtgcacgagagcacaacctcaagggcgtggacatt
gatctgccccgcgacaagatgatcgtctttaccggactgtcggggtcaggcaaatcctcc
ctggccttcgacacgatcttcgccgaagggcagcggcgctacgtggaatcgctgagctcc
tacgcccgcatgttcctcggacggatggacaagccggacgtagacctcatcgaaggcctc
tcgccggccgtatccatcgaccagaaatccaccaaccgcaacccacgatccaccgtgggc
accgtcaccgaaatcttcgactacctgcgcctgctctacgctcgcacgggcgtgccgcac
tgcccggaatgcggcgaagtcatccagcggcaaacgccgcaggagatcgtggaccagatc
ctcgccatggagcaagggctgaagttccaggtgctcgcgcccgtggtgcgcacccgcaaa
ggcgagtttgtggacctgttcgaggacctggccagccagggctactcccgcgtgatggtc
gacggggaagtccaccagctctcgaacccgccgaagctggaaaagcaggtcaagcacgat
atcgacgtggtggtggaccgcctacaggtcaagcccacgcaaaagcagcgcctcaccgac
tccgtagagaccgcactgaacctcgccgacggcatcgtggtgctcgacttcgtggggctt
ggcgacgacgacccgaaccgtacccggcgattctccgaaaagatggcctgccccaacgga
caccccatcaccctggacgagttggaaccgcgcacgttctccttcaactccccatacggc
gcctgcccggcgtgtgatggcctgggcacccgccttgaagtggacgagaagctggtgatc
cccgacgaagacgcgccgctgatccacgccatcgcgccgtgggcatccagccccaacagc
aaatactttgtcaagctcctcaccgcactgtccgaacaactgggcattgaggccaccacg
ccctggagcaagctcaccaaaacccagcgcaaggccgtgctgcacgggcactccgccacc
atcaaggtgagctaccgcaaccgctacggacgtgcccgcaactacagcgcaccgttcgaa
ggcgtgatgccattcctcaccaggaagatggaccagaccgactccgactgggccaaggat
cgctaccgcagttacatgcgcgaagtagcctgtcccacctgtaacggcacgcgcctgaag
cccgaggtgctggcagtaacgatcgcctcggggaagaaggaactgtccatcgccgaagtc
tccgacctctcgatcgcagacgccagcgagttcctcgacaacctcacactgaccaagcgg
caagaaatgatcgccggagccgtgctgcgcgagatccaagcgcggctgaaattcctgctg
gacgtgggcctgaactacctctccatgtcccgctccgcaggcacgctatccggtggcgaa
gcacagcgcatccgcttggccacgcagatcggctccggcctggcgggcgtgctgtacgtg
ctggacgagccctcgattggcctgcaccagcgcgacaacgaacggctcatccgcacactc
gagcacctgcgcgacctgggcaacacactgatcgttgtggagcacgacgaagacacgatc
cgcaccgccgactggctggtggatatcggtccgcgcgccggggaatacggcggcgaggtg
gtgtaccaaggcgagccgcagggcatctacgacgtggaggaatccctcacgggcaactac
ctctcgggcgcgcgggtgctggcggtgccggagagccggcggccggtggataagaagcgc
atgctcaccgtgcacggggcgcaggaaaacaacctgaaaaacgtggacgtgaacatcccg
ctcggcgtactgacatgcatcacgggcgtatccggcagtggcaagtcctcgctgatcaac
ggcatcctggctcgcagcctggccaacacgcttaacggcgcgcggctggtgccggggcac
cacaagaagatcagcggcaccgaacacctggacaagctggtgcaggtggaccaatcgccg
attggtcgcacgccgcgatccaacccggccacatacaccggcgtgttcgacaagatccgc
aaactgttcgccgaaaccaccgaggcgaaggtgcgcggctacaccgctgggcgcttcagc
ttcaacgtcaagggtgggcgctgcgaggcctgccacggcgacggcaccctgaagatcgag
atgaacttcctgccggacgtgtacgtgccgtgcgaagtgtgtcacggtgcccgctacaac
cgggagaccctggaagtgcactacaagggcaagaacatctccgaagtgctggacatgccg
atcaccgaggcagcggagttcttcgcgcccgtgacctcgatctcgcggtacttggacacc
ctcgtggacgtggggctgggctatgtgcgcctggggcaatcggccaccacgctgtccggt
ggcgaggcccagcgcgtgaagctggccgcggagctgcagaagcgatccaacggccggacg
atctacattctggacgagccgacgacgggcctgcacttcgaggacattcgcaagctcatg
ctggtcatccaggggctggtggacaagggcaacagcgtgctcatcatcgagcacaacctg
gacgtgatcaaggctgccgactggatcgtggacatgggtccggagggcggatctggcggc
ggcaccgtggttgcggagggcacgccggagcagatcgcgaaggtgaaggaatcccacacg
ggccgctacctggcttcgctggtgtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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