KEGG   Camponotus floridanus (Florida carpenter ant): 105250085
Entry
105250085         CDS       T03919                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    105250085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cfo03009]
    105250085
Enzymes [BR:cfo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     105250085
Ribosome biogenesis [BR:cfo03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    105250085
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 105250085
NCBI-ProteinID: XP_011254279
Position
Unknown
AA seq 238 aa
MNEMGYKRKKREENDYEYDPAPKHLQVGHIKNQEKRLIVILENAQLESVKVGNSFELLNC
DDHINILKKNNRDPGTCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRI
PRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPISDHLPVGCRKILMSFSANKVVHP
REFVPSQDPIAIVVGAMAHGQVKTDYTEDTISISNYPLSGAVTCSKLCTAFEEVWEIV
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaacgaaatgggatacaagagaaaaaagcgagaggagaatgattatgaatacgatccc
gctccgaaacatttgcaagtaggacatattaagaatcaagaaaagcgtcttatcgttata
ttggagaatgctcaattggaatctgtcaaagttggaaacagttttgaactattaaattgt
gatgatcatataaatattttaaagaaaaacaatcgtgatccaggtacatgcaggccagac
attgttcaccaatgtctattaatgttgatggacagtccattaaatagggccggactgttg
caagtttatattcatacagaaaaaaatgtgttaatagaaattaatccacagaccaggata
ccaagaacatttaaacgctttgctggattgatggtgcaactattgcataaatatggcgtt
agagcatctgatggaccaatgaagctccttaaagtaattaaaaatcctatatcggatcac
ttgccagttggttgccgtaagatattaatgtcattcagtgcaaacaaagtagtacatcca
cgagagtttgtaccttcccaagatccaattgctattgtagttggagctatggcacatggc
caagtgaaaacagattatacagaggatactatctcaatcagcaattatcctctctcaggt
gctgttacatgtagcaaattatgtacagcatttgaagaagtttgggaaattgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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