KEGG   Camponotus floridanus (Florida carpenter ant): 105254903
Entry
105254903         CDS       T03919                                 
Name
(RefSeq) ATP-dependent RNA helicase dbp2
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105254903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfo03041]
    105254903
   03009 Ribosome biogenesis [BR:cfo03009]
    105254903
Spliceosome [BR:cfo03041]
 Complex A
  U1 snRNP components
   U1 related factors
    105254903
 Complex B
    105254903
Ribosome biogenesis [BR:cfo03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    105254903
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 AAA_19 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 105254903
NCBI-ProteinID: XP_011262177
Position
Unknown
AA seq 615 aa
MFSRDRDQGRGRRGGTIRTGTSRGGSDNGRGHIASRFATLGRGSANNVRGGLKGKQPGGG
LRKVNWDLRTLEPLRKDFYIEHPAVRNRSNEEVSQFRENAEITVKGENVPNPIQYFEEGN
FPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RLSNGDGPIVLVLAPTRELAQQIQEVANCFGETAAVRNTCIFGGAPKGPQAHDLERGIEI
CIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYVHLNIGSLTLSANHNITQIIDVCHEYEKDSKLYRLLQEIGTEK
ENKTIIFVETKRKVDDITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNVNPRLSEMAEMAKAGNFSGRGAKRFGASGGNGTERGNGRRGNDGRGRGGTSTRG
RGPSRGGSSYQSSSSVYSGSDYNNYNNMKQSSSLGQQSTTYGYSTQRSYGQGSMPQNYGS
SDNYGSGYPYRGTTY
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtttagtcgtgaccgagatcagggtaggggccgtcgtggtggaactatcaggacaggt
actagtagaggaggcagtgataatggacgtgggcacattgctagcagatttgctacactt
ggtagaggaagcgctaataatgtacgaggcggattaaaaggaaagcaacctggtggtggt
ttaagaaaagtaaattgggatcttcgcactttggaaccactacgcaaagatttttatata
gagcatcctgcagttagaaatagatctaatgaagaagtaagtcaatttcgcgaaaatgca
gaaataactgtaaaaggtgaaaatgttcccaatcctatacaatattttgaagagggaaat
tttccaccctatgtaatggagggtattcgtagacaaggatactcacagcctactccaatt
caagcgcaaggatggcctattgcccttagtggtagagatcttgtagcaattgctcaaacc
ggttcaggaaagacacttggatacattttacctgcaattgtgcatatcatacatcaacca
cgcttaagcaatggagatggtccaattgtcttggtcttagctccaactagagaattagca
caacaaattcaagaagtagctaattgctttggagagactgcagctgtaagaaatacatgt
atctttggtggtgcgccaaaaggtccgcaagcacatgatttggaaagaggcatcgaaata
tgcattgctactccaggtagacttatagatttcttagaaagagggactacaaatttacgt
agatgtacatatctagtactcgatgaagcagatcgtatgttagacatgggattcgagcct
cagatacgaaaaataatcgagcaaatacgtcccgacagacaagttttaatgtggtccgcg
acatggcctaaagaagttcgcgcccttgccgaagattttttgacggactatgttcatctt
aatatcggctctttgaccctatcggccaatcacaatatcactcaaatcattgatgtttgt
catgagtatgagaaagattcgaaattgtatagactgcttcaagagattggtactgaaaaa
gagaataaaaccattatatttgtggaaactaaacgtaaagtggacgatatcacaagaaac
attagacgtgatggatggcaagccgtgagtattcacggtgacaagaatcagcaagaaaga
gatcatgtgctacaagaatttcgcagcggaagagcaccgattttagtcgcaaccgatgta
gctgctagaggtttggacgtggatgatgtgaaatatgtgataaatttcgattatccatcc
tcatcggaggactacatacatagaatcggtcgaaccgggcgtagacgacaaactggaacg
gcatacgcgtttttcacgagtcacaatatgaagcatgctggagacttgatagaggtgtta
cgagaagctgggcagaatgtcaatccacgtctcagtgaaatggcggaaatggccaaagca
ggaaattttagcggcagaggtgcaaaacgttttggtgcttctggtggtaatggtactgaa
agaggtaacggtcgaagaggcaatgatggtagaggaagaggaggtacttcaacaagagga
agaggtccttctcgtggcggaagttcttatcaatcttcttcaagtgtttattcaggatcg
gattataataattataacaatatgaaacaaagttcttctttgggtcaacaaagtacgaca
tatggatatagcacacaaagaagctatggacagggaagtatgcctcaaaattatgggagt
agcgataactatggaagcggttatccatatagaggcacaacttattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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