KEGG   Camponotus floridanus (Florida carpenter ant): 105257167
Entry
105257167         CDS       T03919                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03420  Nucleotide excision repair
cfo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105257167
  09124 Replication and repair
   03420 Nucleotide excision repair
    105257167
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cfo03051]
    105257167
   03400 DNA repair and recombination proteins [BR:cfo03400]
    105257167
Proteasome [BR:cfo03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    105257167
DNA repair and recombination proteins [BR:cfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      105257167
SSDB
Motif
Pfam: UBA ubiquitin XPC-binding Rad60-SLD Ubiquitin_2 Crinkler TBK1_ULD UBA_3 Dsc3_N Rad60-SLD_2 Ubiquitin_5 OTU1_UBXL CUE ALIX_LYPXL_bnd Ubiquitin_4 UN_NPL4 UBA_2 DUF4248
Other DBs
NCBI-GeneID: 105257167
NCBI-ProteinID: XP_011265925
UniProt: E1ZYJ5
Position
Unknown
AA seq 363 aa
MIITLKNLQQQTFTIEIDSSQTVKDLKEKIETQKGFPAEHQKLIYAGKILADEQPLTEYN
IDEKKFIVVMVTKPKAGATPKTSEEQRAESTDNKEESTSSATTQPSSNPTVQETLQAASN
VQEQSAVPTPAAGQAESALLMGEDYNTMVNNIMDMGYEREQVVQALRASFNNPDRAVEYL
LTGIPAQLFEDPPEDPPEAQEQLQDQSQDPLAFLRMQPQFQQMRQVIQQNPQLLNNLLQQ
IGSTNPALLQLISQNQEAFVRMLNEPVEPATGAGARVLPTSGGGVASATAAAAAGGAVNG
GAGTGAAAGVGSGTIQITPQDRDAIERLKALGFPEHLVVQAYFACEKNENLAANFLLSQN
LDD
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgattataacgttgaaaaacttacagcagcaaacgtttacgatagagatcgactcgtcg
caaaccgtcaaagatttgaaggagaagatcgaaacgcaaaaaggctttcctgccgagcat
cagaagttgatatacgctgggaagatattggcagatgagcaaccgttaacagaatataat
atcgatgagaagaagtttatagttgttatggtaacaaagcctaaagctggtgctacgccc
aaaacaagcgaagaacagcgcgcggagagtacggataacaaggaagaatctaccagctcg
gcaactacgcaacctagttcgaatcctactgttcaagagactttgcaagctgctagtaat
gtgcaagagcaatccgcagtacctacaccagcggctggtcaagcagaaagtgccttgcta
atgggagaggattataatactatggtaaacaacatcatggatatggggtatgaacgcgaa
caggttgtacaagcgttacgcgcgagttttaacaatcctgatagagccgtcgagtatctt
ctaacaggtataccggcgcaactctttgaagatccacccgaggatccaccagaagctcag
gaacaactccaggatcagagtcaagatccattggccttcttgcgtatgcaaccacagttt
caacaaatgcgtcaagtcattcaacagaatccgcagctgctgaataatcttcttcagcaa
atcggttctactaatcccgccttattgcagctcatttctcaaaatcaggaagcgttcgta
cgcatgctcaatgaacctgtggagcctgctacaggagcgggagcgcgagttttgccaaca
tctggaggaggcgtagcgtctgcaactgcagcggctgcagcgggaggtgctgtaaacggc
ggagctggtacgggtgcagctgcaggcgtaggatccggtacaatccaaataacgccacaa
gacagggatgctatcgaaaggttgaaggcattaggttttccagaacacttagttgtacaa
gcatacttcgcctgtgaaaagaatgaaaatctcgctgctaatttcctactctcgcaaaat
ctcgacgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (18)   
   Pfam (18)   
All databases (33)   

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