KEGG   Campylobacter fetus subsp. testudinum pet-3: CR44_06135
Entry
CR44_06135        CDS       T03583                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cfp  Campylobacter fetus subsp. testudinum pet-3
Pathway
cfp03030  DNA replication
cfp03430  Mismatch repair
cfp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CR44_06135
   03430 Mismatch repair
    CR44_06135
   03440 Homologous recombination
    CR44_06135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cfp03032]
    CR44_06135
   03400 DNA repair and recombination proteins [BR:cfp03400]
    CR44_06135
Enzymes [BR:cfp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CR44_06135
DNA replication proteins [BR:cfp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CR44_06135
DNA repair and recombination proteins [BR:cfp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CR44_06135
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon T2SSK
Other DBs
NCBI-ProteinID: AJB45799
Position
complement(1229508..1233503)
AA seq 1331 aa
MSDFTHLHLHTEYSLLDGANKIKVLAKRLKELNIKSCAITDHGNMYGALDFYKTMKAEGI
KPIIGLEAYIHNHEDISNKESRQRFHLCLFAKNEIGYQNLMYLSSMSYIKGYYYYPRINK
KLLREHREGLVCSSACLAGEVNFHLNLSDRNLKRGAGGYESAKRVALEYKDIFGDDFYLE
IMRHGIGDQQRIDDDIIRLSMETGIKLIATNDAHYTTKDSAVAQKIFVYISANKNFDDKV
REQVLSEFYAKSADEMSAIFADMPEVIENTNEIVEKCNLEIKLGDATPPNFKFTQEYAKE
RGITLPNPQNEYDLQNDSFLFEYECRQGLEKRLEFIDPSKHQMYKDRLDLEINTINNMKF
PGYMLIVADFINEAKNRGIPVGPGRGSAAGSLVAYALRITDIDPLPYNLLFERFLNPERI
SMPDIDVDFCQNRRGEVIDYVIEKYGEYNVAQVATFGKLLAKGVIRDVARVMGMPYSEAD
AMAKLIPDELGITLKAHKNKKGDMEDGAFEKEPKIGELIAKNDLAKQVWEYSCELEGLNR
NPGMHAAGIVISNEELWKKAPLWKQSNAEAGHYVTQYTKDYLEDVDLIKFDFLGLKTLTV
IDNAKKLIKERFGVDILWEKIDFNDQKTYETIQSGNTLGIFQIESSGMQSLAAKLRPDCF
EDIIAMIALYRPGPLNSGMVDDFIDIKHGKKKIEYAFSALKPILEPTYGVIVYQEQVMQV
VQTVGGFSLGGADLVRRAMSKKKEDEMLHLKTQYLEGAKKNGFDEGKADALFELIMKFAE
YGFNKSHSAAYALITFQTAYLKTYYPAEFMAALLTSEENNIDKIIKYIDEIKRLNIKLLP
PNVNYSVREFSVIQKDGSDSIIYGMAAIKGVGVGAVEDIIKAREEGPFESVDSFISKTDC
TTVNRRVFESLIKSGAFDDFGFTRKMLIHNLETIIENSKRISDIKKNATNSLFSDDDSMN
EISVDLVNIKDEFDKKEILKFEQEILGVYVSGHPLDEYRDKIDKIDYTISSEFENVEDGS
EILVVGKIEDASTKITKTGKKMAIINILDIHGNMEATAFDEYKKIESMSQDELDEPHAFK
IILNKDAQQFKLKINDIISLDDALYKRFTLKSSKLTDDEVFKFQDYFDTIKHSTIKDIPN
LTKESEILIIGKMSQINTRTTKSGMEMAILNIVDISGNSEMIAFDSTSKFIANMSEDEQD
KIYAFKVAPNKDAQSKPIINQIISLDDAKNGNYTLKTNRRRYEPRVNEQSTPATITGKLE
VDIDIISLDKQKINYIYQLAHSYHQKNGNKRLVLRITNNYDKEVMIFSTEFIVSDEFKSE
LDTILNEAKAG
NT seq 3996 nt   +upstreamnt  +downstreamnt
atgagcgatttcacacatttacatttacataccgaatattcattgttagacggtgcaaac
aagataaaagttttagccaaaagattaaaagagctaaatataaaatcatgcgctataacc
gatcacggaaatatgtatggggcgcttgatttttataaaactatgaaggctgaaggtata
aaacctatcataggacttgaagcttatatacataatcatgaagatataagcaacaaagag
agtaggcagagatttcatctttgtttatttgctaaaaatgagataggatatcagaatctt
atgtatcttagctcgatgtcatatataaaaggatattactactatccaagaatcaataaa
aaacttttaagagaacatagagaaggtctagtatgtagctccgcatgccttgctggagag
gtaaatttccatttaaatttaagtgatagaaatttaaaaagaggggctggtggatatgaa
tctgccaaaagagtagctttggagtataaagatatattcggcgatgatttttatcttgag
attatgagacacggtataggtgatcaacaacgaatagatgatgatataatcaggctttct
atggaaactggtataaagctgatagctacaaacgatgcccactatactacaaaagatagc
gcagtagctcaaaagatatttgtatatatctcagcaaataaaaacttcgatgataaagta
cgagagcaagttttaagcgagttttatgctaaatctgctgatgagatgagtgctattttt
gctgatatgccagaagttatagaaaatacaaacgagatagtagaaaagtgcaatttagaa
ataaaactaggagacgcaactccgccgaattttaaatttactcaagaatatgcaaaagag
cgtggtataactctacctaatccgcaaaatgaatatgatttgcaaaatgatagttttttg
tttgagtatgagtgcagacaagggcttgaaaaaagacttgagtttatcgatccttcaaaa
catcaaatgtataaagataggctagatcttgagataaatactataaataatatgaaattt
ccgggctatatgcttatagtggccgactttataaacgaggcgaaaaatcgtgggatacca
gtaggtcctggacgtggaagtgcggctggaagcctcgtggcttacgctcttcgcattact
gatatcgatcctttgccttacaacttactatttgagagatttttaaatccagagcgtata
agtatgccagatatcgatgtggatttttgtcaaaatagacgtggggaagttattgattat
gttatagaaaagtatggagaatacaacgttgctcaagtagcaacttttggtaagcttttg
gcaaaaggtgttataagagatgttgcaagagttatgggtatgccgtactctgaagcagat
gctatggcaaaacttataccagacgagcttggtatcacgctaaaagcgcataaaaataaa
aaaggcgatatggaagatggcgcatttgaaaaagagccgaaaattggtgagcttatagca
aaaaacgacttagcaaagcaagtttgggaatactcttgtgagcttgaaggattaaataga
aatcctggaatgcacgctgcaggtattgttataagcaatgaggagttatggaaaaaggct
cctttgtggaaacaaagcaatgctgaagccggtcactacgtaactcaatacacaaaagat
tatcttgaggatgttgatcttatcaaatttgactttttggggcttaaaactttaaccgta
attgataatgcaaaaaagctaattaaagagcgttttggagtagatattttatgggaaaaa
atagattttaacgatcaaaaaacttatgaaactattcaaagcggaaatacacttggtata
tttcagatagagtcaagcggtatgcaatcccttgctgcgaagcttagaccagactgcttt
gaagatatcatagctatgatagcgctttatcgtcctggacctttgaattcaggaatggtt
gatgactttatagatattaaacatggtaaaaaaaagatagaatacgctttttctgcttta
aagcctatacttgagccgacgtacggagttatagtttatcaagagcaagttatgcaagtt
gttcaaacagtcggaggatttagtcttggaggtgcggatcttgtaaggcgcgctatgagc
aagaaaaaagaagatgagatgttgcatcttaaaactcagtatttagaaggtgcgaaaaaa
aatggttttgatgaaggtaaagcagacgcgctttttgagcttattatgaaatttgctgag
tatggatttaacaaatcccactcagcggcgtatgcgcttataacttttcaaacagcgtat
ttaaaaacgtattatccggcggaatttatggctgctttgcttactagcgaagagaataat
atagataaaattataaaatatatcgatgagatcaaaagacttaatataaagctacttcct
ccaaatgtaaattactcagtaagagagtttagcgttatacaaaaagatggaagcgactcc
attatctacggtatggcggcgataaaaggcgttggtgtaggagctgtggaagatatcata
aaagctagagaagagggaccttttgaaagtgttgatagctttatatcaaaaacagattgt
acaaccgtaaatagacgtgtttttgagtctcttataaaatctggcgcatttgatgacttt
ggctttactagaaagatgctgatacacaacctagaaaccatcatagaaaactcaaaacgt
atatcagatatcaaaaaaaatgctacaaattctctatttagcgatgatgatagtatgaat
gagataagcgttgatcttgttaatatcaaagacgaatttgataaaaaagagatacttaaa
tttgagcaagagatacttggagtttatgtttcaggtcatccattagacgagtatagagat
aaaatagataagatagactacaccatatcaagcgaatttgaaaatgtggaagacggaagc
gagatattagtagtaggtaagatagaagatgcaagcacaaagataacaaaaactggtaag
aaaatggctatcataaatatccttgatatccatggaaatatggaagctacggcatttgat
gagtataaaaaaatagaatctatgagccaagatgagcttgatgagccacatgcgtttaaa
attattttaaataaagacgctcagcaattcaagctaaaaataaatgatataataagcctt
gatgatgccttatacaagagatttacacttaaatcaagcaagcttactgatgatgaggta
tttaaatttcaagattattttgatactatcaagcactctacaataaaagatattccaaac
ttaaccaaagaaagtgaaatacttatcataggaaaaatgagtcagataaacacaagaact
actaaaagcggtatggaaatggctatattaaatatagttgatataagtggcaattctgaa
atgatagcttttgattctactagtaaatttatagcaaatatgagcgaagacgagcaagat
aaaatatacgcttttaaagtcgctccaaacaaagatgctcagtcaaaacctataataaat
cagataattagtcttgatgatgcaaaaaatggaaattacactcttaaaacaaatagaaga
cgatatgagcctagggtcaatgagcaaagcactcctgctacaataacaggaaaacttgaa
gttgatatagatatcatcagtttagataagcaaaagataaattatatctatcagcttgct
cactcttatcatcaaaaaaatggaaataaaagattagttcttagaataactaataattat
gataaagaagtgatgatttttagcactgaatttatcgttagtgatgagtttaaatcagag
ttagataccatattaaacgaagctaaggcaggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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