KEGG   Citrobacter freundii complex sp. CFNIH3: C2U38_01435
Entry
C2U38_01435       CDS       T06381                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
cfq  Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cfq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    C2U38_01435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfq03021]
    C2U38_01435
   03400 DNA repair and recombination proteins [BR:cfq03400]
    C2U38_01435
Enzymes [BR:cfq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     C2U38_01435
Transcription machinery [BR:cfq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     C2U38_01435
DNA repair and recombination proteins [BR:cfq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      C2U38_01435
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AUV24424
UniProt: A0A2I8S1M7
Position
284833..285822
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactttgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactacatgagtacagcaccaaagaaggcgttcaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgacgttattctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccatgatggtgat
gtcgaaatcgtcaagccacagcacgtgatctgccacctgaccgatgagaatgcatctatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctacccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggtacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaacttgaagctttcgttgacttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactatatcggtgat
ctggtacagcgtactgaggttgagcttcttaagacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcttcccgtggactgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa

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