KEGG   Camelus ferus (Wild Bactrian camel): 102504956
Entry
102504956         CDS       T02979                                 
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
  KO
K14327  regulator of nonsense transcripts 2
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03013  Nucleocytoplasmic transport
cfr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102504956 (UPF2)
   03015 mRNA surveillance pathway
    102504956 (UPF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfr03019]
    102504956 (UPF2)
Messenger RNA biogenesis [BR:cfr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     102504956 (UPF2)
   mRNA cycle factors
    P-body specific factors
     102504956 (UPF2)
SSDB
Motif
Pfam: MIF4G
Other DBs
NCBI-GeneID: 102504956
NCBI-ProteinID: XP_032329911
UniProt: A0A8B8SI46
Position
35:complement(8598604..8712900)
AA seq 1028 aa
MPAERKKPASMEEKESLLNNKEKDCSERRPVSSREKPKDEIKLTTKKEVIKVPEDKKKKL
EEDKRKKDDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQVKRQQEEEAAQL
KEKEESVQLHQEAWERHQLRKEFRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDCKEAKEPKDNKEVPNPDDLELELENLEINDDALELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NSDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKD
SMPEGEKS
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagacgag
atcaaacttaccaccaagaaggaggttattaaggtccctgaagataagaagaagaaactg
gaagaagataagagaaaaaaagatgacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagagaaaaagaaacacgaggaagaa
gagagaaagaagcaagaagagcaggtgaaacgtcagcaggaagaggaggctgcccagttg
aaagagaaagaagaatccgttcagcttcatcaggaagcttgggaacgccatcagttaagg
aaggaatttcgtagcaaaaaccaaaatgctccagataaccggccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaatactgcttttgtcaagaagttaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaggctgtagcttctattgtggaagcgaagctgaaaatctctgatgtgaattgt
gctgtgcacttatgctctctctttcaccagcgctatgccgacttcgccccatcacttctt
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaag
ttaagaaccgatttgcgtttcattgcagagttgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgaccgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgccgcagagaagtttaatttgagttttcctcctagt
gagatcattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagctgaccttttggat
gaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacaccgggtaagcctggagattatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgaaaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagattccaacaaggatgattgcaaa
gaagcaaaagaacctaaggataataaggaggtaccgaatcctgatgatttggaacttgag
ttggagaacctagagattaatgatgatgctttggagttagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttgcccaactgtgtgaaccgc
gatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaatagg
aagaagttggtacgggcactctttatagttcccagacaaaggttggatttgctcccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtgcgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaacttactaagtttaagatgttcacaaaa
aatgatacactgcattgtttaaagatgcttctgtcagacttttcccatcaccatattgaa
atggcatgtaccctgctggaaacatgtggaagatttcttttcagatctccagaatctcat
ctgaggaccagtgtacttctggaacaaatgatgagaaagaaacaagccatgcatctcgat
gcgagatacgtcacaatggtcgagaatgcctattactactgcaacccacccccagctgaa
aaaacagtgaaaaagaagcgtcctcctctccaggaatatgtccggaaacttctgtacaag
gatctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccctggcag
gaccaagaagtaaaagactatgtcatttgctgtatgataaacatctggaacgtgaaatac
aacagcattcattgtgtggccaacctcctagcagggctcgtgctctaccaggaggatgtt
ggaatccatgtcgtagatggagttttagaagacatccgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaaattcttaggagaactttataattac
cgaatggtggaatcggctgttatttttagaactctttattcttttacttcatttggtgtt
aactctgatggttctccaagttccctggaccctcccgagcaccttttcaggattagacta
gtgtgcactattttggatacctgcggccagtactttgacagaggttccagtaaaagaaaa
ctcgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagatcatccatttcctattgacatagattacatgatcagtgacaccctagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactcaaaagac
tctatgccagaaggagaaaaatcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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