KEGG   Collimonas fungivorans: CFU_3954
Entry
CFU_3954          CDS       T01583                                 
Symbol
fis
Name
(GenBank) macromolecule metabolism; basic proteins
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
cfu  Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cfu03000]
    CFU_3954 (fis)
   03036 Chromosome and associated proteins [BR:cfu03036]
    CFU_3954 (fis)
   03400 DNA repair and recombination proteins [BR:cfu03400]
    CFU_3954 (fis)
Transcription factors [BR:cfu03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    CFU_3954 (fis)
Chromosome and associated proteins [BR:cfu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CFU_3954 (fis)
DNA repair and recombination proteins [BR:cfu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      CFU_3954 (fis)
SSDB
Motif
Pfam: HTH_8 HTH_30 HTH_17 HTH_23 Xre-like-HTH Phage_CP76 HTH_psq Phage_NinH DUF2681 HTH_29 UPF0175 HTH_28
Other DBs
NCBI-ProteinID: AEK63777
UniProt: G0AF50
Position
complement(4639603..4639836)
AA seq 77 aa
MSKESIQDVVKQSLEKYFKDLGEQPPSNVYDMVISTVEKPVLEAVIARAEGNQSHAAEML
GINRNTLRKKLQQHGLL
NT seq 234 nt   +upstreamnt  +downstreamnt
atgagcaaagaaagtatccaagacgtggtgaagcaaagccttgaaaaatatttcaaggac
ctgggcgagcagccgccgtcgaatgtgtatgacatggtgatttccacggtcgaaaaaccg
gtgctggaagccgtgatcgcgcgcgccgaaggcaaccagtcgcatgccgccgaaatgctg
ggcatcaatcgcaacaccttgcgcaagaaattgcagcagcacggtcttttgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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