KEGG   Cystobacter fuscus: CYFUS_007032
Entry
CYFUS_007032      CDS       T05065                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
cfus  Cystobacter fuscus
Pathway
cfus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CYFUS_007032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfus03019]
    CYFUS_007032
Messenger RNA biogenesis [BR:cfus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CYFUS_007032
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 P-loop_SecA AAA_19 PG_binding_2
Other DBs
NCBI-ProteinID: ATB41566
UniProt: A0A250JEH4
Position
complement(8827369..8828754)
AA seq 461 aa
MEGGGLAPGVRADEDSESWPGRLGRVGGRKARWSYLGGRDTPGRVTDTFAQLGLSPEALD
AVRRARFSRPTPIQAKAIPPALEGRDVIGCAATGTGKTAAYVLPLVERLAGQEGTLGLVL
APTRELVQQISETVRFFGESRGVSHAVVIGGEDMGAQAGALERRPTLVLATPGRLVDLLK
SGLVDFTRLRTLVLDEADRMLDMGFQEQLERILAALPRRRQTLLFSATLSPDVSDFAAAE
LHRPVRVEVTRSGTPAERAEQRLYVVKPEEKSALLLALLARDEATALVFAGTKERADKVH
KALQRAGYRCGVLHADRTQNQRNQAMQAFRDGTYRCLVATDIAARGLDVEDVGHVINYDL
PHEPEDYVHRIGRTARASASGVASTFVTAKDRQMTEKIERVMRANIPRAEVPREDPVFQA
EMARREAAQRDPGPPQKDQGVKKTEGQAPGRHARTHKRNVR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggaggggggtgggttggcgccaggcgtccgggcggacgaggactcggagtcctggccg
ggacgcctggggagggtggggggacgaaaggcccggtggtcctacctcggggggcgtgat
acccccggccgggtgaccgacaccttcgcccagcttggactgtcccccgaggcgctcgac
gccgtgcgtcgtgcccggttctcgcggcccacccccatccaggcgaaagccattcctccg
gcgctcgaggggcgggacgtcatcgggtgtgccgccacggggacgggcaagacggccgcg
tacgtgctgcccctggtggagcgcctggcgggtcaggaggggacgctgggactggtgctg
gcgcccacgcgcgagctggtgcagcagatctccgagacggtgcgcttcttcggcgagtcg
cgcggggtgtcacacgcggtggtcatcggaggcgaggacatgggggcgcaagcgggggcg
ctcgagcggcggcccacgctggtgctggccacgccggggcggctggtggacctgttgaag
tcgggcctggtggacttcacgcggctgcggacgctggtgctcgacgaggcggaccggatg
ctggacatgggcttccaggagcagctcgagcggattctcgcggcgctgccccgccggagg
cagacgttgttgttctccgcgacgctgagtccggacgtgagcgacttcgcggcggcggaa
ctgcaccggcccgtgcgggtggaggtgacgcgcagtggcacgccggccgagcgcgccgag
cagcggctgtacgtggtgaagcccgaggagaagtcggcgctgctgctcgcgctgctggcg
agggacgaggcgacggcgctggtgttcgcggggacgaaggagcgggcggacaaggtgcac
aaggcgctgcagcgggcggggtaccggtgtggggtgctgcacgcggaccggacgcagaac
cagcgcaaccaggcgatgcaggcgtttcgggacgggacgtaccggtgcctggtggccacg
gacatcgcggcgcgggggctggacgtggaggacgtggggcatgtcatcaactacgacctg
ccgcacgagccggaggactacgtgcaccggattgggcgcacggcacgggcctcggcgagc
ggggtggcctccacgttcgtcacggcgaaggaccggcagatgacggagaagatcgagcgg
gtgatgcgcgcgaacattccccgggcggaggtgccgcgagaggatccggtcttccaggcg
gagatggcgcggcgggaggccgcccagcgcgaccccgggccgccgcagaaggaccagggc
gtgaagaagaccgagggccaggcacccgggcggcacgcgcggacgcacaagaggaatgtg
cgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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