KEGG   Cyanobium gracile: Cyagr_0552
Entry
Cyagr_0552        CDS       T02359                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cgc  Cyanobium gracile
Brite
KEGG Orthology (KO) [BR:cgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cgc03009]
    Cyagr_0552
Enzymes [BR:cgc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Cyagr_0552
Ribosome biogenesis [BR:cgc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Cyagr_0552
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_25 MTS Methyltransf_23 Methyltransf_11 UPF0020 Methyltransf_15 Met_10
Other DBs
NCBI-ProteinID: AFY27743
UniProt: K9P423
Position
complement(563938..565308)
AA seq 456 aa
MASVGDRLELEITDLGHDGQGVGRHDGQVVFVSGALPGDTVQVRLQVVARRHLVGQLQRV
LAPSPNRRRPPCILADNCGGCSLQPLADGAQAAWKQRSLEQALQRIGGLSAPVRPLLAAD
PALGYRNRALIPLERRADGRLRAGYYRRGSHQIVNMARCPVLDPRIDALIAPLKADIEAS
DWPIDRHGNDPEAVEGPGLRHLGLRVGAATGELLITLISSHDDLPGLEALADAWCERWPE
LVGVCLNLQPLPTNRLMGEETRVIRGREWLHESFAGLRFRIAADTFFQVNTGQAERLVPD
VIEALGPAPAGGSLLDAYCGIGTYSLPLAAAGWQVSGLELHQGSVTLARLNASANGLEGR
ASFEQADVPQVLEERLQGVQALVLDPPRKGLNPIATAAILAARPERIAYVSCDPAALARD
LAQLCSSGVYRLNWVQPVDFFPNTSHVEALAALERL
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcctcggtgggcgacaggcttgagctggagatcaccgacctgggccatgacgggcag
ggggtggggcgccacgacgggcaggtggtgttcgtcagcggcgcgctccccggggacacc
gtgcaggtgcggctgcaggtggtggcgcggcgccatctggtgggtcagctgcagcgggtg
ctggcgccctcgcccaaccgccgccggcccccctgcatcctggccgacaactgcggtggc
tgcagcctgcagcccctggcggacggggcccaggccgcctggaagcagcgcagcctggag
caggccctgcagcgcatcggcggcctgagcgccccggtgcggccgctgctggcggccgat
ccggccctgggctaccgcaaccgcgccctgattccgctggagcgccgggccgatggccgc
ctgcgggccggctactaccgccggggttcgcaccagatcgtcaacatggcccgctgcccg
gtgctcgacccgcgcatcgatgccctgatcgcccccctcaaggccgacatcgaagccagc
gactggccgatcgatcgccacggcaacgaccccgaggccgtggagggtcccggtctgcgc
cacctgggcctgcgggtgggggcggccaccggggagttgctcatcaccctgatcagcagc
catgacgacctgcccggcctcgaggccctggccgacgcctggtgcgaacgctggccagaa
ctggtgggtgtctgcctcaacctccagcccctgcccaccaatcgcctgatgggcgaagag
acccgggtgatccgtggacgggagtggctccacgagagcttcgccggcctgcggttccgc
atcgccgccgacaccttcttccaggtcaacaccggccaggccgaacggctggtgcccgat
gtgatcgaggccctgggcccggctcccgccggcggctccctgctcgatgcttactgcggc
atcggcacctacagcctgcccctggccgccgccggctggcaggtcagcggcctggagctg
caccagggctcggtgaccctggcccggctgaatgcctccgccaacgggctggagggacgg
gcgagcttcgagcaggccgacgtgccccaggtgctggaggagcgcctgcagggagtgcag
gccctggtgctggatccaccccgcaaggggctgaacccgatcgccaccgcggcgatcctg
gcggcgcgaccggagcggatcgcctacgtgagctgcgatccggcggccctggcccgcgac
ctggcccagctgtgcagctcaggggtctaccggctgaactgggtgcagcccgtcgacttc
ttccccaacaccagccacgtggaggccctggcggccctggagcgtctctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (54)   

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