KEGG   Cupriavidus gilardii: CR3_0780
Entry
CR3_0780          CDS       T04050                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
cgd  Cupriavidus gilardii
Pathway
cgd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cgd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CR3_0780 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgd03021]
    CR3_0780 (rpoZ)
   03400 DNA repair and recombination proteins [BR:cgd03400]
    CR3_0780 (rpoZ)
Enzymes [BR:cgd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CR3_0780 (rpoZ)
Transcription machinery [BR:cgd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CR3_0780 (rpoZ)
DNA repair and recombination proteins [BR:cgd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CR3_0780 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ALD90030
UniProt: A0A0M3SV81
Position
1:937545..937748
AA seq 67 aa
MARITVEDCLKHIPNRFELALAATYRARQLVQGHTPKVEAKDKPTVVALREIASGQVGIE
MLKKVPT
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcgcgtattaccgtcgaagattgtctgaaacacatcccgaaccgcttcgagctcgcg
ctcgcggcgacctaccgcgcgcgccagctggtgcaggggcacacgccgaaggtcgaggcc
aaggacaagccgaccgtggtggcactgcgcgagatcgcgtcgggccaggtcggcatcgaa
atgctgaagaaggttccgacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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