KEGG   Cricetulus griseus (Chinese hamster): 100752735
Entry
100752735         CDS       T02813                                 
Symbol
Col12a1
Name
(RefSeq) collagen alpha-1(XII) chain isoform X3
  KO
K08132  collagen type XII alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cge00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100752735 (Col12a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cge00535]
    100752735 (Col12a1)
Proteoglycans [BR:cge00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   100752735 (Col12a1)
SSDB
Motif
Pfam: fn3 VWA VWA_2 Pur_ac_phosph_N Collagen Interfer-bind DUF4998 VWA_3 CBM_4_9 Copine Toxin_R_bind_N Arylsulfotran_N
Other DBs
NCBI-GeneID: 100752735
NCBI-ProteinID: XP_027266874
UniProt: A0A061IAR2
Position
4:complement(190530489..190642127)
AA seq 3120 aa
MHTRLPRALAALGVALLLSSIEAEVDPPSDLNFKIIDENTVHMSWERPFDPIVGYRITVD
STTEGPTKEFTLAAGTTETLLSDLIPETDYVVTITSYDEVEESVPVIGQLTIQTGGPTKP
GEKKPGKPEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIAALVSAFDIGEEKTRVG
VVQYSTDTRTEFNLNQYYRRDDLLAAIKKIPYKGGNTMTGDAIDYLVKNTFTESAGSRAG
FPKVAIIITDGKSQDEVDIPARELRNIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLVATDVSSKYIKLRWDPSPSA
VTGYKILLTPMAAGGRHHALSVGPQTTTLNVRDLSADTEYQISVSAMKGLTSSEPISVME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLAKSFEISPNRVQIS
LVQYSRDPHTEFTLKEFNRVEDIIKAINTFPYRGGSTNTGKAMTYVREKIFVPNKGSRSN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPPETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLRFTQVTSNSFKAEWSPAGENVF
SYHVTYKDATGNDEVTVVEPASSTSVVLSNLKPETLYLVNVTAEYEDGFSIPVAGEETTA
EVKGVPRNLKVTDETTDSFKITWSQAPGRVLRYRIIYRPVSGGESKEVSTPANQRRKTLE
NLTPDTKYEISVIPEYSSGPGSPLTGNAATEEVRGNPRDLRVSDATTSTLKLSWSGAPGK
VKQYLVTYTPAAGGETQEVTVDGDTTNTVLRRLKEGTQYDLSVTALYASGAGEALSGKGT
TLEERGSPQNLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDIEAGEKNLPGDAIHT
MIENLQPETKYKISVFATYSSGEGEPVTGDATTELSQDSKTLKVDEETEHTMRVTWKPAP
GKVVNYRVVYRPQGGGRQMVAKVPPTVTSTVLKRLQPQTTYDITVLPMYKTGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVLGPYDN
TVVLEELRAGTTYRVNVFGMFDGGESLPLVGQEMTTLSDTTVTPFLSSGMECLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEIFDIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQSFRTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEIELKMIATDPDDTHAYNVADFESLSKIVDDLTINLCNSVK
GPGDLEAPSNLVISERTHRSFRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRLETSTV
LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDVGPTTMHVQWQPVGGA
TGYTVSYQPVRAPEATKPKEMRVGPTVNDVQLTGLLPNTEYEVTVHAVLHDLTSEPAKAR
EATLPLPRPQDVKLRDVTHSTMNVIWEPVLGKVRKYIVRYKTPEEEFKEVEVDRSRASTT
LKDLSSQTPYTVSVSAVYDEGESPPASAYETTRRVPAPTNLQFTEVTPESFRGTWDHGAS
DVSLYRITWAPIDNPDKMETILNGDENTLVFENLNPNTLYEVSITAIYPDESESDDLSGS
ERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITHQPSTGEGNEQT
TTVGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS
TLSVRWDHAEGNPRQYKLFYAPTAGGPEELVPIPGNTNYAILRNLQPDTPYTVTVVPVYT
EGDGGRTSDTGRTLVRGLARNIQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSE
SIVVPGNTRTVHLERLIPDTPYSVNIVALYSDGEGNPSPSQGRTLPRSGPRNLRVFGETT
NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVILQPLQPDTPYKITVIAI
YDDGDGGHLTGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP
MEAFVGEVTSYTLHNLNPSTTYDVSVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQVGWD
TFCVKWSPHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPEAEYGVTVFVQTPN
LEGPGVPIKEQTTVKPTEAPTEPPTPSPPPTIPPARDVCKGAKADIVFLTDASWSIGDDN
FNKVVKFIFNTVGAFDEVNPGGIQVSFVQYSDEVKSEFKLNTYNDKALALGALQNIRYRG
GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAAFVIQQSGFSVFVV
GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS
PGFKMLEAYNLTEKNFASVQGVSLESGSFPSYSAYRLQKNAFINQPTAELHPNGLPPSYT
IILLFRLLPETPSDPFAIWQITDRDYRPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTD
EVKTLFYGSFHKVHIVVTSKSVKIYIDCYEIVEKDIKEAGNITTDGYEILGKLLKGDRKS
ATFQIQSFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAGGP
GAKGPRGERGINGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPG
LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGTPGSPGVTGPSGKPGKPG
DHGRPGQSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMSRFNQMLNQIPNDYHSNR
NQPGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGIGSVGPRG
PPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQG
YPEPYVPEGGAYLPDREPFIVPVEPERTAEYEEDYGADEPEREHPDHMRWRRALRPGPGQ
NT seq 9363 nt   +upstreamnt  +downstreamnt
atgcataccaggcttccccgagcgctggccgccctgggcgtggccctactgctgtcttcc
attgaggctgaagttgacccaccttccgatttgaattttaaaattatagatgaaaatact
gttcatatgtcatgggagagaccatttgatccaattgtgggttacagaataacggtggac
tctacaacagagggacctactaaagaatttacccttgcagctggtaccactgaaactcta
ttatcagacctcattcctgaaacggactatgtggtgactataacttcctatgatgaagta
gaagaaagtgtgccagttatagggcagctgacaattcaaacaggtggtccaacaaaacca
ggggagaagaaacctggaaaaccagagatacaaaagtgctcggtcagtgcctggactgat
ttagtctttcttgtggatggctcctggagtgtgggaagaaataatttcaagtacatttta
gacttcattgctgctcttgtgtctgcttttgacattggggaggagaagacaagagttgga
gttgttcagtacagcacagataccaggactgaatttaacttaaatcagtattaccgaaga
gatgacctgcttgctgcaattaagaaaataccttacaaaggtggcaacacaatgacaggg
gatgccattgattacttggttaaaaacactttcactgaatctgctggctcaagagctggc
tttcctaaagtggcaattattatcacggatggcaaatctcaggacgaagtggatattcca
gctcgggagcttcggaatattggagttgaggttttctctctgggtattaaagctgcagat
gcaaaagaactcaaacaaattgcatccacaccttccttgaaccatgttttcaatgtggcc
aattttgatgcaattgtggacattcaaaatgagataatctcccaggtgtgttcaggagtt
gatgagcaacttggtgaactggttagtggagaagaagtcatcgaacctccctcaaatctg
gttgccacagatgtctcatcaaagtacattaagctgcgctgggatccgtctcccagcgct
gtgaccggctataaaatcctcctcacaccaatggccgcaggaggccgacatcacgctttg
agtgtggggcctcagacgaccacgctcaatgttcgtgatctctcagctgacacggaatac
cagatcagtgtttctgccatgaagggactgacatccagtgagcccatttcagtaatggag
aagactcagccaatgaaagttcaagtggaatgttcacgtggtgtggatataaaagctgat
atcgtgtttttggttgatggttcctatagcatcgggattgcaaacttcgttaaagttaga
gcctttttggaagttcttgcaaaaagttttgagatctcaccaaacagggtacagataagc
ctggtccaatacagcagagaccctcacactgagttcacattgaaggaatttaacagagtt
gaagatataatcaaagcaataaacaccttcccctacaggggaggatccacaaacacaggc
aaagcaatgacttatgtcagagagaaaatatttgtgcctaacaaaggatcaagaagtaat
gtcccgaaggtcatgattctcatcactgatgggaagtcatcggatgctttcagagaccct
gctataaaactcagaaattcggatgtggagatcttcgcagtaggcgtgaaggatgctgtt
cgctctgagttggaagccattgcctctcctcctccagagacccatgtgttcacagtggag
gattttgatgcctttcagaggatatcgtttgaactcacccagtctatctgtcttagaatt
gagcaagagttggcagctataaagaagaaagcttatgtgccaccgaaggatctgaggttt
actcaggtgacttctaatagtttcaaagccgaatggtctcctgctggagaaaatgttttt
tcctatcatgtcacatacaaagatgctactgggaatgatgaggtcacagtggtggagcca
gcttcgagcaccagtgttgttctcagcaacctgaaaccagagaccctgtacttggtaaat
gtgactgcagagtatgaagatggcttcagtattcccgtagctggagaggagaccacagct
gaagtaaaaggagtaccacgaaacctgaaggtgacagatgagactacagacagttttaaa
attacctggtctcaggctccagggagagtcttaaggtatcgaatcatatacagaccagtt
tctggtggagaaagcaaagaagtcagtaccccagccaatcagaggaggaaaacactggag
aacctgacaccagacacaaagtatgaaatatctgtaattcctgaatattcctctggacct
ggctctccactgacaggaaatgcagccactgaagaagttagagggaatccaagagactta
agagtttctgacgctacgacatcaactctaaagttgtcttggagtggggcaccaggaaaa
gtgaagcagtatcttgtcacgtacacaccagcagcaggaggtgaaactcaagaggttact
gtggacggagatacaaccaacacggtgttgaggcgattgaaggaagggacacaatacgac
ttatctgtgacagcactgtatgcatctggggctggagaagccctttctggtaaaggaaca
acacttgaagaacgtggttcaccccaaaatctagttacaaaagatatcacggacacttct
attggggcctattggacatctgctccaggaatggttcgtgggtacagagtctcatggaag
tcactttatgatgatattgaggctggagagaaaaatcttcctggagacgcaattcatact
atgatagagaatctacagccagagacaaagtacaaaatttcagtttttgcaacttacagc
agcggagaaggagagcccgtgactggagatgccacaaccgaattatcccaagattctaaa
accttaaaagtggatgaagaaaccgaacacacgatgagagttacgtggaaaccagcacca
gggaaagttgtcaactaccgtgttgtgtatcgccctcaagggggagggagacaaatggtc
gctaaggtgccacccacagtcacttcaacagtgctaaagagacttcaaccccagaccaca
tacgacattacagttctcccgatgtataagacaggagaaggaaagctgaggcaaggatca
gggacaacagcttctagatttaagtcaccaagaaacctcaaaacttccgatccaacaatg
tcaagtttccgagtgacttgggagcctgcccctggggaagtgaaaggttacaaagtcacg
ttccatcctactggtgatgacagaagactaggggagttggtccttggaccatatgacaac
actgttgtcttggaggagcttagggcaggcaccacctatagagtcaatgtttttgggatg
tttgatggaggagaaagtttaccacttgttgggcaagaaatgacaaccctttctgacaca
actgtgacaccatttttatcctctgggatggagtgtctcaccagagcggaagcagacatt
gtgttgctggtggatgggtcgtggagcatcggccgtgcaaattttagaaccgtgaggagc
tttatttctcgtattgtggaaatctttgatattggtcccaagagagtacaaattgctctc
gctcagtacagtggagaccccagaacagagtggcagttaaatgctcacagagacaagaag
agtttattgcaggctgtggcgaacttaccgtacaaaggaggaaacaccctcacgggcatg
gctttgaatttcattcgccaacagagcttcaggacccaagctggcatgaggcctcgtgct
cgcaaaattggagttctcattactgatggaaaatcacaagatgacgtggaggctccatca
aagaaactcaaggatgaaggagtggagctgtttgctattggtattaagaatgctgatgaa
attgaactaaaaatgattgctactgatccagatgacacccatgcatacaatgtggcagat
tttgagtcattatccaagattgtggatgacctcaccatcaacttgtgtaacagtgtcaag
ggccctggtgacttggaagcaccatctaacttagttatatctgagaggactcaccgttct
tttagagtgagctggacacctccttctgacagtgtggacagatacaaggtggaatattac
cctgtttctggaggaaaacgccaggagttttatgtgagccgactagaaaccagcacagtg
ctgaaagatctgaagcctgagaccgagtatgttgtgaatgtgtactctgtggttgaagac
gaatacagcgagcctctgaagggcacagagaaaaccttgccagtcccggtagtcagcctg
aatatttatgatgttggccccaccaccatgcatgtacaatggcagcctgtgggaggagct
actggctatactgtgtcataccaaccagttagagcccctgaagcaacaaaacccaaagag
atgcgtgtggggccaacagtgaatgatgtgcagctgaccggcctccttcctaacacagag
tatgaggtcactgtccatgctgtcctgcatgacctcactagtgaacctgccaaagctcgg
gaagccacgttacccttacccagacctcaagatgtgaaactcagagatgtgactcacagc
accatgaatgtcatctgggaacctgtgcttggaaaagttcgtaaatacattgttagatac
aaaactccagaagaagagttcaaagaggtggaggtggacagatcaagggccagcaccacc
ctcaaagacctctcctctcaaaccccgtacacagtgagcgtttctgcagtgtacgatgag
ggcgaatctccccctgcgagtgcttatgagacaacccggcgtgttccagcaccaacaaac
ctacagtttactgaagtaacaccagagagtttcagaggaacttgggaccatggagcttca
gatgtgtctctctatagaataacctgggcacctattgacaatccagacaagatggagacc
atcttaaatggagatgaaaataccttggtgtttgaaaatctgaaccccaacactctgtat
gaagtttccattactgccatctatcctgatgagtctgaaagtgatgacctgagtggcagc
gagcgcacattgcgtttgatacccttaacaacacaagctccaaaaagtggtccacggaac
cttcaggtgtataatgccacatctaacagcttgactgttaagtgggatcctgctagcggt
cgtgtgcagaaatacaggatcacacaccagccttccacaggagaaggcaatgaacaaacg
accacagtaggaggacggcagaacagcgtggtcctgcagaaactgaagcctgacactcca
tacaccatcacggtgtcctccctctatcctgatggtgaaggtggccggatgactggaagg
ggcaaaacaaaacctctgaacaccgtgaggaacttgagagtctatgacccttctaccagc
accttgagtgttcgctgggaccatgcagagggcaatcctcgacagtacaaactcttctat
gccccaacagcaggtggccctgaagaactggtaccaatccctgggaataccaactatgcc
attctcaggaacctgcagccagatactccatacactgtcacagtggttcctgtctataca
gaaggtgatggcggacgcacatcagacactggaaggacattggtgagaggactggcaaga
aacatccaagtgtacaaccctacacccaacagccttgatgtccgctgggaccctgctcct
gggccagtacagcagtaccgcattgtatactcccctgttgctggcacaagaccctcagaa
tctattgtggtgccagggaatacccgcacggtgcatctggagaggctgattccggacaca
ccctattctgtaaacattgtggctctctactcggatggagaggggaatcccagccccagc
cagggccgaacacttccacgaagtggtccaaggaatcttcgggtctttggggagacaacc
aacagcctgtccgtagcctgggatcatgctgatgggccagttcagcaatataggatcatc
tattcccctaccgttggtgatccgattgacgaatataccacagttccaggcaggagaaac
aatgtaatattgcagcccctgcaacctgacactccatataaaattactgtcattgccatc
tatgatgatggagatggtggccatctaactggaaacggaaggactgtgggattgcttcct
cctcagaacatacatatctctgatgaatggtatacaaggttcagagtctcctgggaccca
tcaccctcaccagttcttggatataaaattgtgtacaagccagtgggttccaatgagccc
atggaagcctttgttggagaagtgacatcatacacattacacaatctcaatcccagcact
acctatgacgtcagtgtttatgctcaatatgactctgggctcagtgttccccttacagat
caaggcaccacactgtacttaaatgtgacagacctgaaaacttatcaagttggctgggat
acattctgtgtcaaatggtcacctcatcgggcagctacttcctacaggctaaaactgagt
cctgcagatggaaccagaggacaagaaattacagttcgaggatcagaaaccagtcactgt
ttcacgggcctctccccagaggctgagtatggcgtcactgtttttgtgcagacaccaaat
ctggaggggccgggtgtccccatcaaggaacagaccactgtaaaaccaacagaggctcct
acggaaccaccaacaccttctcctcctcccactattccacctgcccgtgatgtatgcaaa
ggggccaaggcagacattgtgttcttgacagacgcctcttggagtattggagatgacaat
tttaacaaagttgtaaaatttatctttaatactgtgggggcctttgatgaagtcaaccct
ggagggattcaggtttcttttgtgcagtacagtgatgaggtcaagtctgagttcaagctg
aacacatacaacgacaaggctctagcccttggagccctccagaacattcgctacagagga
ggaaacacaagaacaggcaaggccctcacgtttatcaaggagaaggtcttgacctgggag
agcggcatgaggaagaatgtcccaaaggtgctggtggtggtcacagatggccggtcacag
gatgaggtgaagaaggcagcgtttgtcatccagcagtcagggttcagcgtattcgtggtt
ggtgtggctgatgtggactacaacgaacttgccaacattgccagcaagcccagcgaaagg
catgtgttcattgtggatgacttcgaatcttttgagaagatcgaggacaatcttatcaca
tttgtttgtgaaactgccacttcaagttgtcctctcatctatctggatggctacacctca
ccaggctttaagatgcttgaagcttacaacctgacagaaaagaattttgcttctgtccaa
ggagtctctttggaatcaggctctttccccagctattcagcctataggctacagaagaat
gcctttatcaatcagccaacagcagaactccatccaaatggactccctccttcatacacg
atcatattattgtttagacttctcccagaaactcccagtgacccctttgcaatttggcaa
attacagacagagactacaggccacaagttggagtgattgcagatccttccagcaagaca
ctatctttctttaacaaggatacaagaggcgaggtacagactgttacatttgacacagat
gaagtgaagacgttattttacggaagttttcataaggtccatattgtagtgacctcaaaa
agtgttaagatttatattgactgctatgaaattgtggaaaaagacatcaaggaagctgga
aatatcacaactgatggctatgaaattcttggaaagcttcttaaaggagataggaaatca
gcgacattccaaatccagagctttgacattgtctgcagcccagtgtggaccagcagagac
agatgctgtgacattccctctaggagagatgaagcaaaatgccctgctcttccgaatgct
tgcacatgtacacaggacagcgttggacctccaggccctccaggccctgcaggaggacct
ggtgcaaaaggtcccagaggtgaaagaggcatcaatggtgcagttgggcctccaggtccc
cgtggagatacaggccctccaggccctcagggtcctccaggcccccagggacccaatgga
ctctccattccaggagaacagggtcgccaggggatgaaaggtgatgcgggagagccaggg
cttcccggccggacaggaaccccaggattgcctggccccccaggaccaatgggaccacca
ggagacagaggtttcactggcaaagatggtgcaatgggacctagagggccaccagggcca
ccgggaaccccaggctctccaggagtcacagggccaagtgggaaaccaggaaaacctgga
gaccacggcagaccaggtcaatctgggttaaaaggagaaaaaggtgataggggagacatt
gcttctcagaacatgatgcgagcagttgcaagacaagtctgcgaacagctaataagtggt
caaatgagcagattcaatcagatgctgaatcagattccaaatgactaccactcaaatcgc
aaccaacctggcccaccagggcccccagggccccctggcagtgctggagccagaggagaa
ccagggcctggggggcgaccaggatttcctggcacaccagggatgcagggaccccctggt
gaacgaggtttgcctggagagaaaggtgaaaggggcattggttctgtaggaccccgaggg
ccaccgggacctccaggtccacaaggagaatccagaacgggcccaccagggtctacaggt
tcaagaggcccccctggtcctcctggtcgtcctggaaactcaggtatccggggaccccca
ggtcctcctggatattgtgattcatcccagtgtgccagcatcccatacaatgggcaaggc
tatccagagccttatgtgcccgagggtggggcgtacctgcctgatcgtgagcccttcatc
gtgcctgtggagcctgagaggacagcagaatacgaggaggactacggtgcagacgagcct
gaacgggagcaccctgaccacatgcgttggcggcgcgccctgcgcccaggccctgggcag
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (31)   
   RefSeq(nuc) (5)   
   GenBank (13)   
   EMBL (13)   
Protein domain (12)   
   Pfam (12)   
All databases (95)   

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