KEGG   Cricetulus griseus (Chinese hamster): 100754802
Entry
100754802         CDS       T02813                                 
Symbol
Ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43 isoform X2
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
Organism
cge  Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:cge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cge03041]
    100754802 (Ddx43)
Enzymes [BR:cge01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100754802 (Ddx43)
Spliceosome [BR:cge03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100754802 (Ddx43)
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 MOEP19 ResIII KH_2 KH_5 P-loop_SecA
Other DBs
NCBI-GeneID: 100754802
NCBI-ProteinID: XP_027267196
UniProt: A0A8C2LG83
Position
4:189469181..189489460
AA seq 646 aa
MSRREPAPNASSSGVAPRRSSTVSRGAERTAAEEPSRRGRVGSKGAGGGWREPRGATAEA
AAGRREPPLCFGVKNDVVGAVIGRGGSKIREIQNTTNTRIQVIKGNPEAEIKIFGNKAMQ
TKAKTVIDNVVKKQQNYIPGHRVDIIAFQPSVGKDVSKSDSVTEDQPLIDWDQIREDALK
WEKKKWADLPPIKKNFYIESPTTRSMTQVQIDNWRKENFNITCDDLKEGEKRPIPNPVCK
FEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFI
HLDSQPLPRDQRNGPGMLVLTPTRELALQVEAECSKYSYSDLKSVCVYGGGDRDGQIQDV
SKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQ
TIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQTFLE
NMSPKDKVIVFVSRKAVADHLSSDLILRHISVESLHGNREQSDREKALENFKTGKVRILI
ATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVANEL
INILERANQSIPEELVLMAERYKANKLKREMEKKMGRPQGKPQKFY
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtctaggcgggaaccagcacccaacgcttcctcctcgggcgttgctccgcgtagaagc
tcgacggtgtcccgcggcgccgagcggacagcagcggaggagccgagccggagaggccgg
gtcgggagcaagggggcaggcggcggctggagagagcccaggggtgccaccgccgaggcc
gctgccggccgccgcgaaccgccgctctgtttcggggtgaagaacgacgtggtgggcgcg
gtgataggtcgtggtgggtcaaaaattagagaaatccaaaatacaacaaatactagaata
caggtaataaaaggaaatccagaggcagaaatcaaaatttttggcaataaagccatgcaa
acgaaagcaaaaacggtgatagataatgttgttaaaaaacaacagaattacattccagga
cacagagttgatattattgcattccaaccctctgttggaaaagatgtcagtaaaagtgac
agtgtaacagaagatcagccattgatagattgggatcaaatccgagaagatgctttgaaa
tgggaaaagaaaaagtgggcagatttaccaccaattaagaaaaacttttacatagagtca
ccaacgacaaggtcaatgacacaagtgcaaatagacaactggaggaaagaaaactttaat
ataacatgtgatgacttgaaagaaggtgagaagcgtcctatccccaaccctgtatgtaaa
tttgaagatgcctttcaaagttacccagaagttatggaaaacattaaaagagcaggcttt
caaaaacctacaccaattcagtcgcaggcatggccaatagttctgcaaggaatagatctt
attggagtagcacaaactggaacagggaagacactgtcctatttaatgcctggatttatc
catctagactctcaaccactacctagagatcaaagaaatggaccaggcatgctagtcctt
acacctacccgggagttagcccttcaagtagaagctgaatgttctaaatattcatatagt
gatcttaaaagtgtttgtgtatatggtggtggtgatagagatggacaaatccaagatgtt
tcaaaaggtgtagacatcattattgcaactcctggaagattgaatgacctacaaatgaat
aactttgtcaacctgaaaagtgtaacctatttggttttagatgaagcagacaagatgttg
gacatgggatttgaaccccagataatgaaaattttgttagatgtacgccccgaccggcag
actattatgacaagtgctacttggccatatgctgtccgacgtcttgcacaatcttatttg
aaagagccaatgattgtctatgttggtactttggatctagttgctgtaagtacagtgaag
caaaatataatcatcaccacagaagaagagaaacgaactcatatccaaacattcctagag
aatatgtcacctaaagataaagtcattgtctttgtcagcagaaaagctgttgctgatcac
ttatcaagtgacctgattctccgacacatatcagtagaatctctgcatggcaatagagaa
cagagtgaccgagagaaagcattagagaactttaagacagggaaagtgaggatacttatc
gctactgacttggcatctcgaggacttgatgttcatgatatcacccatgtctacaattat
gactttccacggaacattgaagaatatgtacacagagtaggacgcactgggcgagcaggg
cgaacaggcatgtcaattacccttatcacaagaaatgattggagggttgccaatgagctg
attaatattctggaaagagcaaatcagagtataccagaggaacttgtcttaatggctgag
cggtacaaagctaataaactaaaaagagagatggaaaaaaaaatgggaagacctcaagga
aaacctcagaagttttactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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