KEGG   Cricetulus griseus (Chinese hamster): 100760563
Entry
100760563         CDS       T02813                                 
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X2
  KO
K15446  tRNA:m4X modification enzyme [EC:2.1.1.225]
Organism
cge  Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:cge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cge03016]
    100760563
Enzymes [BR:cge01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.225  tRNA:m4X modification enzyme
     100760563
Transfer RNA biogenesis [BR:cge03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    100760563
SSDB
Motif
Pfam: TRM13 zf-TRM13_CCCH zf-U11-48K Methyltransf_32
Other DBs
NCBI-GeneID: 100760563
NCBI-ProteinID: XP_027251389
UniProt: A0A9J7F9I6
Position
1
AA seq 482 aa
MEGPAPTSHAASGVPAEGRCSYFVEKKRRFCRMVAAAGKRFCGEHAGAAEGENARKRILC
PLDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDEMENPEQLVPFSSLSEEQL
ENLIKKLRKASEGLNSTLEDHIMSHPSLNDALNDPKNGDCAVKHLKQQASILGNIEKLKL
LGPRRCFVEFGAGKGKLSHWVDIALKDAENVHFLLVEKVTTRFKVDGKHRKKNSLFERLQ
IDIQHLCLNRIPVLQEGRLPVVGIGKHLCGVATDLALRCLVETYAASFEERNEEPLAKRI
KNDKTEKESNILFKEGNEKNIPEMWTPVAGIVIALCCHHRCDWRHYVGKEYFKALGLGAV
DFYYFQRMSSWATCGMRRTSLEASDITTKRKDDQNSDNDEHDDGGDRLTDGSTDGVPGIL
TAEEKKNIGHLCKLLIDQGRLQYLQQKGFSPALQYYTDPSVSLENVLLTAVPAHLSSQEA
TH
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggagggtcccgcgccgacctcgcacgcggcgagcggcgttccagccgagggcaggtgc
agctacttcgtggagaagaagaggcgcttctgcaggatggtggcggccgcgggcaagagg
ttctgcggagagcacgccggagccgccgagggagaaaatgctcgaaaaagaatcttgtgt
cctttagatccaaaacacactgtatatgaagaccaactagcaaaacatttaaaaaaatgt
aactcaagagagaagccaaagcctgatttctttattcaagatataaatgcaggattaaag
gatgaaatggaaaatcctgaacaattagttccattttcttctctatctgaagaacagttg
gaaaacttaattaagaaattgagaaaagcaagtgaaggcttgaattctacacttgaagat
cacattatgtcccatccatcattaaatgatgcccttaatgaccctaaaaatggtgattgt
gcagtcaagcacctaaaacagcaggcttctattttaggtaacattgaaaaattaaagtta
cttggtccaagaagatgctttgttgagtttggagcgggaaaggggaaattatctcactgg
gttgatattgccttaaaagatgctgaaaacgttcacttcctcctggtagaaaaagtgacc
acaagattcaaggtagatggtaaacacagaaaaaagaactcactgtttgaaagacttcaa
attgatattcaacacttgtgtttgaacaggattcctgtgctacaagaaggaagactgcct
gtggtaggaattgggaagcatctgtgtggggtcgcaacagatcttgcattacgatgtttg
gttgaaacctatgctgccagttttgaagaaaggaatgaagaacctttagccaaacgcata
aagaatgataaaacagaaaaagaaagtaacattttgttcaaggaaggaaatgaaaaaaat
atcccagagatgtggacccctgtggccggtattgtcattgcactctgttgtcatcacagg
tgtgattggagacattatgtgggcaaagagtatttcaaggctctaggccttggggcagtg
gacttctactatttccagagaatgagtagttgggcaacatgtggaatgagaaggacatct
ttggaagcctcagatattactacaaagagaaaagatgatcagaattctgacaatgacgag
catgatgatgggggagatagactcacagatggcagcactgatggtgtgcctgggattctt
actgctgaagagaaaaagaatataggacatctttgcaaattgctgattgaccaaggccga
ctccagtatttacaacagaaaggcttcagtcctgctttacagtactatacagacccatcg
gtatctctggaaaacgtgttactaactgctgtaccagctcatctgtcatcgcaggaagca
actcattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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