KEGG   Cricetulus griseus (Chinese hamster): 100762328
Entry
100762328         CDS       T02813                                 
Symbol
Pnldc1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100762328 (Pnldc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    100762328 (Pnldc1)
Enzymes [BR:cge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     100762328 (Pnldc1)
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100762328 (Pnldc1)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 100762328
NCBI-ProteinID: XP_027256765
UniProt: A0A9J7FCH0
Position
2:288154264..288168980
AA seq 534 aa
MDVGADEFAETLSFLHDIIDEADFVGLDIEFTGLRSNSSRPQQISLFDLPSEWYMKTRQS
VQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIRESILRGNWRVRSSLDKDQIKVVIDKVTRWLDLAEEGDR
MTLPGIAGFQAYEVQMVLRQALPNIWTVLKDEGVIVKKVSQPHRWYLENASCDQIRCWRE
EIVLSARGFSVFFKMLVRAQKPLIGHNMMMDLLHLHEKFYKPLPESYDEFKQNIHNLFPV
IIDTKNVTKDIWKEMRFPRVSNLSEVYDVLSSDLNPTNSTGPEIIHASECEKYAETKCPH
EAGYDAFLCGSVLLKVAHLLLERVHDAGSVDELTFSQYLDVLEPYVNQVNLIRAGVPKIN
LSGPDYPSIRPPVLILTVKRWPGVTEHQVYREFQNLCKFDVRRFTQNQFLLLTNKFKDAR
SVLKEYRSHPTLQVALYRYWKHSPNITCLLKVCSIITTWAIVAFVLGRSSPRVR
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggacgtaggtgctgacgagtttgcagagaccctctcattcctgcacgatatcatcgat
gaggcagactttgtgggtctcgacatagagttcacaggtctgcgttcaaactcgtcccgg
ccccagcagatcagtctctttgatttgccatccgagtggtatatgaagacccggcagagt
gttcagcaatttacaatatgtcagattggtttgtctgtgttttccagcattgaaggagaa
tcaaacaagtatgtagcccattcctgtaacttctttctcttccctacaacgtttgggatc
ttggactcggagttctctttccaggcgtctagtgttcagtttttgaatcagtatggcttc
gactataacaagttcctcaaaaatggaatcccatacatgaatgaagagcaggagaagaaa
attagggagagcatcttgagagggaactggagagtccgaagttctctggataaagaccaa
attaaggtggtgattgacaaggtgactaggtggctggatctggctgaggaaggtgaccgg
atgactcttcctggtattgctgggttccaagcctatgaagtccaaatggtcctgaggcag
gccctccccaatatctggacagtgctgaaagatgaaggggtgattgtgaagaaggtcagt
cagcctcatcgctggtaccttgagaatgcctcttgcgatcaaatcaggtgttggagggag
gagattgtgctctctgcaaggggcttttctgtctttttcaagatgttggtgagagcccag
aagcctctgataggacacaatatgatgatggacctactgcatctccatgaaaagttctac
aaacctcttccagaaagctatgatgagtttaagcagaatatccacaacctgtttcctgtc
atcattgacaccaagaatgtgacaaaagacatctggaaggaaatgcgtttcccacgagtc
tccaacctctcagaagtgtatgatgtgctaagcagtgacttgaatcccactaacagtact
ggaccagagattattcatgcaagcgagtgtgaaaaatatgctgagaccaagtgcccccat
gaagctggatatgatgccttcctctgtgggtcagttcttttgaaagtggcgcacttgctc
ctggagagggtgcatgatgctggttctgtggacgagctcaccttctcacaatacctggat
gtgctggagccctatgtgaaccaagtgaatcttatccgagctggggttcctaaaattaat
ctttctggcccagattaccccagtatccggcctcctgtactcatccttactgtcaagagg
tggcctggggtcaccgagcatcaagtctaccgtgagttccagaatctttgcaagttcgat
gtcaggcgattcacccaaaaccagttcctgctcctcaccaataagtttaaggatgcccgc
agcgtcttgaaggagtacaggagccacccaaccctgcaggtcgccctgtaccgctactgg
aaacattcccccaacatcacctgcctgttaaaagtctgcagcatcatcaccacctgggcc
atagttgcatttgtcctgggcagatccagtcccagagtgcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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