KEGG   Cricetulus griseus (Chinese hamster): 100766175
Entry
100766175         CDS       T02813                                 
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03013  Nucleocytoplasmic transport
cge05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100766175 (Ndc1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100766175 (Ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    100766175 (Ndc1)
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100766175 (Ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 100766175
NCBI-ProteinID: XP_027258178
UniProt: G3GTM5
Position
2:complement(42406422..42456217)
AA seq 672 aa
MATAASGPCVGGARDILWRVLGWRIVRSIIWSVLLLPVCTTAFIIFSSIDLFHPIQWLSD
SFNDLCSSHVIFYFLLLSVVIIIISIFNVEFYTVVPSIPGSRLALIGRILHPQQLMHSLI
HAAMGMVVAWCAAIITKGQYSFLVAPCTGTESLDNPAAQTCMNEHHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLPLLVKHSCVESLFVVRNFCIVYYFFGHIPKA
WISTAMDLHIDEQAHRPLDTIGGLLNVSLLYHVWLCGVFLLMTWYISWILFKIYATEAYV
FPVQPPFAEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLSLLNDMTQKLVLYQEAAATNGRMSSSYSVEPKKLNSPEETTFQTPKSSQM
PSVPPLVKTSLFSPKLSTPDVSNPFGTPFGSSVVNRMAGIFDVNTCYGSPQSPQLIRRGP
RLWTHASDQQISDFSNPSPCTSATAEGKTVRQPNVIYSWIQNKREQIKNFLSKRVLIMYF
FSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAV
DKYFKLPHASSKPPRISGSLMDSSYKTLRFAFRASLKTAIYRIATTFGEHLNAVQASAEH
QKRLQQFLEFKE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggccaccgctgcgagtgggccctgcgtcggcggggcgcgggacatcctttggcgcgtt
ttgggttggaggatagttagaagtatcatttggtcggtgttgcttctacccgtctgtaca
acagcctttataatcttcagcagcattgacttattccatcctatacagtggctgtcagat
tctttcaatgacttatgtagttcccatgtaatcttctacttcctgctgctgtcagtggta
attataataataagtattttcaatgtggagttctatacagttgtgccctccatacccggc
tcccggctggccctgataggcagaatccttcaccctcagcagcttatgcactcgttaata
catgctgcgatgggaatggtggtggcgtggtgtgcggccatcatcaccaagggccagtac
agttttcttgtggctccctgtactggaactgagagcttagataaccctgctgcccaaacc
tgcatgaatgaacatcatctctttttcctactggctggggcattcatgggctatagctac
agtcttctatatttcattaacaacatgaattatcttccatttcctattatacagcagtat
aaatttttgcgcttcaggagatctctccctctactagttaaacatagctgtgtggaatcc
ctgtttgtggtcagaaatttctgcattgtgtattatttttttggacatattcccaaagct
tggattagcactgctatggaccttcacatagatgagcaggctcacaggcctcttgacaca
ataggtggcctcctgaatgtctcattactctaccatgtttggctatgcggtgtcttcctc
ttgatgacttggtacatctcatggatactcttcaaaatctatgccacagaggcttatgtg
ttccctgtccagccgccatttgcggaggaatcagatgaatgcctcccgaaagtcctaaac
agcagtcctcctctcatcataaagtatttggccttacaggacctgatgttgctttcgcaa
tattctccttctcgaaggcaagaagtttttagcctcagccaaccaggtggacatccccat
aattggactgccatttcgagggagtgtttgagtcttttaaatgatatgactcagaaactg
gttctctaccaagaagctgctgctacaaatgggaggatgtcttcatcatactcagtggaa
cccaagaaattgaattctccagaagaaactacttttcagacaccaaaatctagccagatg
ccttcagtgccaccgttagttaaaacatcactgttttctccaaaattatccacacctgat
gtttcaaatccttttgggaccccatttggctccagtgtagtgaatcggatggctggaatt
tttgatgtaaacacctgctatgggtctccccaaagtcctcagctaataagaagagggccc
cgattatggactcatgcttctgatcagcaaatatctgacttttctaatccatctccttgt
acctctgccactgctgagggtaagacagtgagacagcccaatgtgatttactcatggatt
cagaataaacgtgaacagattaagaatttcttgtcaaaacgggtgctgataatgtacttt
tttagtaagcatccagaggcctccattcaggctgtattttcagatgcccaaatgcatatt
tgggctttagaaggtctgtctcacttagtagcagcatcatttacagaagatagatttgga
gttgtccagaccacactcccagctatccttaatactttgttaaccctgcaggaggctgtt
gacaagtattttaagctgcctcatgcttctagtaaaccaccccggatttcaggaagcctt
atggactcatcctacaaaacattaagatttgccttcagggcctctctgaaaactgctatc
taccgcatagccaccacgtttggtgaacatctgaatgctgtgcaagcatctgcagaacat
cagaaaagacttcaacagttcttggagttcaaagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (52)   

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