KEGG   Cricetulus griseus (Chinese hamster): 100769928
Entry
100769928         CDS       T02813                                 
Symbol
Cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X2
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100769928 (Cnot6l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    100769928 (Cnot6l)
Enzymes [BR:cge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     100769928 (Cnot6l)
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100769928 (Cnot6l)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100769928 (Cnot6l)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 100769928
NCBI-ProteinID: XP_027243477
UniProt: A0A8C2MUM8
Position
1
AA seq 555 aa
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNDNYLRVLPYE
LGRLFQLQTLGLTGNPLSQDIMSLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQE
VETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcagaatttat
accatcatgtcagcagaggaggtagccaatgggaaaaaatctcactgggcagaattagaa
atctcgggtagagtgcggagcttaagtacatcactttggtcattgacacacttgacagcg
ctgcacctaaatgacaataatcttgctcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaatgacaattatttacgggttttgccttatgaa
cttggccggctcttccagctacaaactctaggtttaacaggcaatcctttatcacaggat
attatgagcttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacggttatgtgttacaatgtgttatgtgataaa
tacgctacccggcagctatatggctattgcccgtcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgggacgcagatatcattagtcttcaggaa
gtggaaacagagcaatactttactctatttctgccagcattgaaggatcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaatcatgtctgagcaggaaagaaaacatgtg
gatggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaattcaaccaggtagcaatggcaaattcagatggatctgaagcaatgctgaacagagtg
atgacaaaagataacattggtgttgctgtggtattagaggttcacaaggaactctttgga
acaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaacttattcagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctcaagtaggcctggcagcccaaccgcagatcct
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgttgtg
gaatatttaagcaatggaggagtagctgacaaccataaagacttcaaggaactgaggtac
aatgagtgtcttatgaacttcagctgtagtggaaagaatggaagctcagaagggagaatc
acacatggcttccaactgaagagcgcctatgaaaataacttgatgccttataccaattac
acctttgatttcaaaggtgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttggatcctcaatggctggttgagaacaacatcactgggtgt
ccacatcctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccactcctgcctcttgttaatggtgttcacttgcctaaccggaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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