KEGG   Cricetulus griseus (Chinese hamster): 100772501
Entry
100772501         CDS       T02813                                 
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03440  Homologous recombination
cge03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100772501 (Top3a)
   03460 Fanconi anemia pathway
    100772501 (Top3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cge03032]
    100772501 (Top3a)
   03400 DNA repair and recombination proteins [BR:cge03400]
    100772501 (Top3a)
Enzymes [BR:cge01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     100772501 (Top3a)
DNA replication proteins [BR:cge03032]
 Eukaryotic type
  DNA Topoisomerases
   100772501 (Top3a)
DNA repair and recombination proteins [BR:cge03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     100772501 (Top3a)
   FA (Fanconi anemia) pathway
     100772501 (Top3a)
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom zf-C2H2_10 Zn_ribbon_recom
Other DBs
NCBI-GeneID: 100772501
NCBI-ProteinID: XP_027283074
UniProt: A0A8C2M075
Position
7:complement(74734902..74782303)
AA seq 1004 aa
MIFPITLLAFQWQRRPGGRALSRAAMEMAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
KEGLSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMRFRKWQSCNPLVLFEAEIEK
YCPENFIDIKKTLERETQHCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSE
ITPRAVRAACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHRIKVTHDHKDGTVEFNWKRYRLFNHTACLVLY
QLCMEDPTATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLVALVEQQTLDPHWGAFAQNILERGGPTPRNGNKSDQAHPPIHPT
KYTSNLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFIAHGLVILARNYLDV
YPYDHWSDKLLPVYEQGFSFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFQVLRQQVQKYKQVFIEAVAKAKKLDEALSQYLGEGTEVVQQEEIYPAMPEPVRKCPQ
CNKDMVLKTKKSGGFYLSCTGFPECRAAVWFPDSVLEASRDSTVCSICQPPPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEILGLRFSQGPPRATQPSGYLQASQALNRMDSSQH
SLSQPLVNRHTGSSKAMAETFPPPTPAGESNSVICNCGQEAVLLTVRKQGPNQGRHFYKC
NGGGCNFFLWADSSHPTGGGGPPTSASRPPGSSMGYTSALGSNVDGFGSLGGDGDGSTSC
LCGQPAVTRTVQKDGPNKGRQFHICAKPREQQCGFFQWVDENMAPGSLAAPPWPGGRGKA
QRPEATSKRLRAGSSDAGSTAKKPRKCSLCHQPGHTRPFCPQNR
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgatcttcccaatcaccctcttagcgttccagtggcagcgacggcctggaggccgtgcc
ttgtcccgtgctgccatggaaatggccttccgaggagtgcgaaaagttctctgtgtggcg
gagaaaaacgacgctgccaaggggatcgccgacttgctgtctaatggtcgtatgcggcgg
aaagaaggcctttctaaattcaacaagatttatgaatttgactatcatctatatggccag
aatgttactatgataatgacttcagtgtctggacatttgctggctcatgatttccagatg
aggtttcggaaatggcagagctgcaatcccctagtcctctttgaagcagaaattgaaaag
tactgtccagaaaattttatagacatcaagaagactctggaacgagagacacagcactgt
caggcactggtgatctggactgactgtgacagagaaggtgaaaacatcgggtttgagatt
atccatgtatgcaaggctgtaaagcccaatctacaggtgttgagagcccgcttctctgag
atcacaccacgtgccgtcagggcagcctgtgaaaacctaactgagcctgaccagagagta
agtgatgcagtggacgtgagacaagagctggatctgaggatcggagctgccttcaccagg
ttccagaccctgcggctccagcggattttccctgaggtcctggcagagcagctcatcagc
tatggcagttgccagttcccaacactggggtttgttgtggagaggttcaaagccattcag
gcttttgtgccagaagtcttccacagaattaaagtaactcatgaccacaaggatgggact
gtagagttcaactggaaaagataccgtctctttaaccacacagcttgtcttgtcctttat
cagttgtgtatggaggatcccacggcaaccgtggtagaggtcagatctaagccaaagagc
aagtggaggcctcaagctttggacactgtggagctagagaagctggcttctcggaaatta
agaataaatgctaaagaaaccatgaggattgcagaaaagctctacacacaagggtacatc
agctacccccgaacagaaacaaacatcttccccaaagacttgaacctggttgcgttggtg
gagcagcagaccctggatccacattggggagcgtttgctcagaacattctagagcgaggt
ggccccactccacgaaatgggaacaaatctgatcaagctcaccctcccattcaccccacc
aaatacaccagcaacttgcagggagatgaacggcgactatatgagttcatcgttcgccat
ttcctggcttgctgctcccaggatgcccaggggcaagagactactgtagagattgacatt
gctcaggaacgcttcatagcccatggcctagtaattctggcccgtaactacctggatgtg
tatccatatgatcactggagtgacaagctcctccctgtctatgagcaaggcttcagcttt
cagcccagcactgtggaaatggtggatggggagaccagcccaccccaattgcttaccgag
gctgacctcattgccctcatggagaagcatggtatcggtactgatgcaactcatgcagaa
cacattgaaaccatcaaagcccggatgtatgtgggacttacctcagacaagcggttcctc
cctgggcacctgggcatgggacttgtggaaggttatgattccatgggctatgagatgtcc
aagccggacctccgtgccgagctggaagctgatctcaagctcatctgtgagggcaagaag
gataagtttcaagttctaaggcaacaagtgcagaaatacaagcaggttttcattgaagca
gtggccaaggcaaagaaattggatgaggccttatctcagtacttaggagaagggacagag
gtggtccagcaagaagagatctacccagccatgccagagcctgttcgaaagtgcccacag
tgcaacaaggatatggtcctcaagaccaagaagagtggtgggttctaccttagctgcaca
gggttcccagaatgtcgggcagctgtgtggtttcctgattcggtgctggaggccagcagg
gacagcactgtgtgttccatttgtcagccaccccctgtgtacaggttgaagttgaagttt
aagcgtgggagccttcccccaaccatgcccctggagtttgttggctgcataggtggatgt
gatgaaactttaaaggaaatcttgggcctgcgattttcacaaggtcccccaagagctacc
cagccctctggctacctgcaggccagccaggccctcaacaggatggacagcagtcagcat
agcctctctcaacctctggtcaacagacatactggatcttcaaaggcaatggctgaaacc
ttcccaccacccactcctgctggtgaaagtaactctgtgatctgcaattgtggccaggag
gctgtgctgcttactgtccgcaagcagggccccaaccagggccggcacttctataagtgc
aatggtggtggttgcaacttctttctgtgggctgacagcagccatcccacaggaggagga
gggccccccacctctgcatcaagacccccaggcagctccatggggtacacgtcagcttta
ggcagcaacgtggatgggtttggcagccttggtggtgatggtgatggaagtacatcctgc
ctgtgtgggcagcctgctgtcacacggactgtgcagaaagatgggcccaacaaaggacgc
cagttccacatctgtgccaagccacgagagcaacagtgtggcttctttcagtgggtagat
gagaacatggctccagggagtcttgcagctccaccgtggcctggaggcagaggaaaagcc
cagagaccagaggctacaagcaaaagactaagagctggttcctcagatgcaggatctaca
gcaaaaaaaccccgaaaatgtagcctttgccaccagcctggacacactcgccccttttgt
cctcagaaccgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (16)   
   UniProt (1)   
   RefSeq(pep) (15)   
DNA sequence (23)   
   RefSeq(nuc) (15)   
   GenBank (4)   
   EMBL (4)   
Protein domain (6)   
   Pfam (6)   
All databases (78)   

Download RDF
DBGET integrated database retrieval system