KEGG   Cricetulus griseus (Chinese hamster): 100772575
Entry
100772575         CDS       T02813                                 
Name
(RefSeq) collagen alpha-5(IV) chain isoform X2
  KO
K06237  collagen type IV alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04151  PI3K-Akt signaling pathway
cge04510  Focal adhesion
cge04512  ECM-receptor interaction
cge04820  Cytoskeleton in muscle cells
cge04926  Relaxin signaling pathway
cge04933  AGE-RAGE signaling pathway in diabetic complications
cge04974  Protein digestion and absorption
cge05146  Amoebiasis
cge05165  Human papillomavirus infection
cge05200  Pathways in cancer
cge05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:cge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100772575
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100772575
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100772575
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100772575
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100772575
  09154 Digestive system
   04974 Protein digestion and absorption
    100772575
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100772575
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100772575
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100772575
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100772575
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100772575
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cge04147]
    100772575
   00536 Glycosaminoglycan binding proteins [BR:cge00536]
    100772575
Exosome [BR:cge04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100772575
Glycosaminoglycan binding proteins [BR:cge00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100772575
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 100772575
NCBI-ProteinID: XP_027289454
UniProt: A0A9J7GME2
Position
X:complement(38802431..38984043)
AA seq 1691 aa
MQVPEVCLAAGWFLLTLCLWGQPAEAAACHGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNQGYPGPPG
IQGPPGPKGISGPSGPPGAPGLMGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGVPGDRGPPGPPGIPGPPGPPGGVKGEKGEPGESGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGLVIPTPGTGVTVGEKGN
IGLPGLPGEKGERGFPGIQGPPGFPGPPGTAVMGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGQPGAPGLPGPPGPPGPHLPPSDEICKAGPPGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGRPGPPGSLGFPGEKGEKGNAGTIGPKGLPGIPGPPGAPGF
PGSKGDPGDVLTLLGMKGDKGELGSPGAPGLPGLPGTPGKDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNMGPMGPVGLGPPGPIGEKGIQGVAGNPGQPGLPGPKGDPGQTIT
QPGKPGLPGNPGRDGEAGLPGDPGLPGQPGLPGIPGSKGEPGIPGVGLLGPPGPKGFPGI
PGPPGAPGTPGRMGPDGPPGSPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGSNGQPGPIGPPGVPGIGIQGPPGPPGTPGPIGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGPPGAPGLTGPPGSPGLPGKAGVPGFPGAKGEIGM
MGPPGPPGPLGIPGRSGAPGLKGDDGMQGQPGLPGPAGEKGSKGEPGLPGPPGPIDPEFL
GSKGEKGEPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGNPGLPGPPGLT
GPPGLKGNIGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGSKGDPGVSGVGLPGHPG
PKGEPGLPGYPGNPGIKGSVGDTGLPGLPGSPGAKGQPGLPGFPGTPGLPGPKGMSGPPG
NPGLPGEPGPVGGGGSPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGSPGIPGSPGLPGPKGEPGFQGFPGMPGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPPGFQGLPGSEGPRGPPGNGGIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGVPGSMGPDGEPGLTGPPGPPGLPGPSGKSIIIKGD
AGPPGVPGQPGLKGPPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGMQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKG
QSIQPFISRCVVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgcaagtgcctgaagtgtgcctggccgccggctggttcttactgaccctgtgtctgtgg
gggcagcccgcagaggctgcggcctgtcatgggtgttctcctggatcaaaatgtgactgc
agtggtataaaaggggaaaagggagaacgaggatttccaggtttggaaggtcatccaggt
ttgccaggatttccaggtccagaagggcctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggagctccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccgggtttcct
ggtttacaaggtcctccaggacctcctgggatcccaggtatgaagggggaaccaggtagt
ataatcatgtcatcactgccaggaccaaagggtaatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtatatcagggccaagtggccctccaggagcacca
ggtttaatgggccctcctggtccaccaggcccaccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaaaggtgagcaaggtcttcagggcccacctggtcca
cctggacagatcagtgaacagaaacgaccaattgatgtagaatttcagaaaggagatcag
ggagttcctggtgatagagggcctcctggacctccaggaatacctggtcctccaggtcct
ccaggtggtgtgaaaggtgaaaagggtgagccaggagaatcaggcaaaagaggtaaacca
ggcaaagatggagagactggacaaccaggaatcccaggtttgcctggcgatcctggttac
cctggtgaaccaggacgggatggggaaaagggccaaaagggtgatattgggccacctgga
cctcctggactagtaattcctactcctgggactggtgtgactgtgggagaaaaaggaaat
attggactacctggtttgcctggagaaaaaggagagcgaggatttcctggaatacaaggt
ccacctggctttcctggacctccagggacagcagtcatgggtcctcctggcccccctgga
tatcctggagaaaggggtcagaaaggtgatgaaggtcctcctggaatttgtattcctgga
tctcctggacttgatggacagcctggggctcctggccttccagggcctcctggtcctcct
ggccctcatttgccacccagtgatgagatatgtaaagcaggccctccaggccccccagga
tctccaggtgataaaggactccaaggagagcaaggagtaaaaggtgacaaaggtgataca
tgcttcaactgtattggaactggaatttcaggtcctccaggccaacctggtttgccaggt
cgcccaggtcctccaggatctcttggattccctggagagaagggtgaaaaaggaaatgct
ggaacaattggcccgaaaggattaccaggcatacctggacctccaggtgctccaggtttt
ccaggatctaaaggtgaccctggtgatgtcctcactcttctgggaatgaaaggtgacaaa
ggagagttgggttctcctggagctccagggcttcctggtctacctggtactcctggaaag
gatggattgccaggactccctggtcccaaaggagagcctggtggaattacttttaagggt
gaaagaggtcctcctgggaacccaggtttgccaggtctcccaggaaatatgggacctatg
ggccctgttggtttggggcccccaggccctataggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggattaccaggtcctaaaggtgatccaggccagaccataaca
cagccagggaagcctggcctgccaggtaatccaggcagagatggtgaagctggccttcca
ggtgatcctggacttccaggccaaccaggcctgccaggaatacctggtagcaaaggagaa
ccaggtatccctggggttgggcttcttggaccaccaggtcccaaaggttttccaggaatt
ccaggacctccaggagcgccaggaacacctggaagaatgggtccagatggccctcctggg
tcaccaggctttccaggaccaaagggagagccaggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcttggatgggctacctggaccaaaaggtgat
gttggatcaaatggacaacctggcccaatagggcctcctggggtgccagggattggtatt
cagggaccaccaggaccaccagggactccaggaccaataggccaacctggcttacatgga
ataccaggagagaagggagatccaggacctcctgggtttgatgttccaggacccccagga
gaaagaggtagtccagggccccctggagcccctggtcttacaggtcccccaggatcacct
ggtctcccaggaaaagcaggtgtccctggattcccaggtgccaaaggagaaataggtatg
atgggacctccgggcccacctggacctttgggaattcctggcaggagtggtgctcctggt
cttaaaggtgatgatggcatgcaaggtcagccaggtcttcctggccctgcaggagaaaag
ggtagtaaaggagaacctggccttccaggacctcctggaccaatagatccagagttcctg
ggatcaaaaggagagaagggtgagcctggcttaccaggtattcctggactttcaggacca
aaaggctaccagggtttgcctggagacccggggcaacctggactgagtggacaacctgga
tcaccaggactaccaggtcccaagggtaaccctggtctcccgggtccaccaggacttaca
ggacctcctggacttaaaggaaacattggtgacatgggttttcctggccctcaaggtgta
gatgggccccctggacctcctggagttcctggacaacctggctctccagggttaccaggc
cagaaaggaagtaaaggagatcctggtgtttcaggcgttggtcttcctggtcatcctggt
ccaaagggtgaacctggtctgcctggatatccaggaaacccaggtatcaaaggttctgtg
ggagatactggtctgcctggattaccaggaagccctggagcgaaagggcagccaggcctg
cctggattcccaggaaccccggggcttcctggaccaaaaggtatgagtggtcctcctggt
aaccctggccttccaggagaacctggtcctgtaggtggtggagggagtcctggccctcca
ggacctcctggcgaaaaaggcaagcctggtcaagatggcattcctggaccagcagggcag
aagggagaaccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtcaaaaaggagatggaggatcacctggcattccaggaagtcctggtcttccaggt
ccaaagggtgaaccaggctttcagggtttccctggtatgccaggtcctccaggtcctcct
ggttctcctggtccagctttggaaggtcctaaaggaaatcctggacctcaaggccctcct
gggagaccaggtcctccaggtttccaaggtctaccaggttcagaaggtccccgtggtccc
cctggaaatggaggtattaaaggagagaggggaaacccaggcccacctgggcaacctggc
ttacctggcttgaaaggagatcaaggaccaccaggactcccgggtaatcccggcaggcca
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggaatg
aaaggacccattggagtaccaggctcaatgggccctgatggggaaccaggccttaccgga
ccaccaggtcctcctggattacctggtccttcaggaaagagcattataatcaaaggagat
gctggtcctccaggggttcctggccaacctggattaaaaggtccaccaggacttccaggc
cctcaaggcttaccaggtccaattggccctccaggagatccaggacgaaatggacttcca
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgcctggacagccaggtacc
cgtggattggatggtcccccaggaccagacggaatgcaaggacctccaggtccccctgga
accacctcagttgcccatggattcctcatcacacgccacagccagacaacagatgcacca
caatgcccacaggggacagtccatatctatgaaggcttttctctcctatatgtacaagga
aataaaagggcccatggtcaagacttggggaccgctggcagctgccttcgtcgattcagt
accatgccttttatgttctgcaacattaacaatgtttgtaactttgcttcaagaaatgac
tattcttactggctgtccaccccagagcccatgccaatgagcatggaacccctgaagggc
cagagcatccagccattcattagtcgatgtgtagtgtgtgaggctccagctgtggtgatc
gcagttcacagccaaactattcaaattccacattgtcctcaggggtgggactcactgtgg
attggttattccttcatgatgcatacaagtgcaggagcagaaggctcaggccaagcctta
gcctctccaggttcctgtttggaagaatttcgttcagctcccttcatcgaatgtcatggg
cgggggacatgcaactactatgccaattcctatagcttttggctagccactgttgatatg
tcagacatgttcagtaaacctcagtcagagacactgaaagctggagacttgagaacacgt
atcagccgatgtcaagtatgcatgaagaggacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (14)   
   RefSeq(nuc) (6)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (93)   

Download RDF
DBGET integrated database retrieval system