KEGG   Corynebacterium glutamicum SCgG2: C629_06820
Entry
C629_06820        CDS       T02691                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cgg  Corynebacterium glutamicum SCgG2
Pathway
cgg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C629_06820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgg03021]
    C629_06820
   03019 Messenger RNA biogenesis [BR:cgg03019]
    C629_06820
Transcription machinery [BR:cgg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     C629_06820
Messenger RNA biogenesis [BR:cgg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     C629_06820
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT AAA_22
Other DBs
NCBI-ProteinID: AGN21964
Position
1457070..1459352
AA seq 760 aa
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLINAISAAREGKPTAAAKK
TSPRKAPSRTRVTQPSAPVEQAQEAPAQTSTAPASAPSEETPAAPARRGRRRVTTTATTP
EPAAPAQSQPAEAQPAQTQAAQQEELPVAAKESAPATENTQGQSQGQAQGDEHDDRFESR
SAARRARRNRQRQIHRDGDDNANANTESEQNTPAQNATAQAESEQTAPPAQAEAAEQNQN
DNSESSENRSDNYRNNNRRSRNNRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDD
RRSRNNRNNDRNDRNDRNDRDNHNDDNDDRRNRRGRRNRRGRNDRNDRDNRDNRDNRDNS
NDGDNNQQDELQQVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRSGDAIEG
QVRMNQGGGNHNNHGRNRQKYNNLVRVEMVNGLPAEETRNRPEFGKLTPLYPNQRLRLET
EQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMVVLVDER
PEEVTDMQRSVNGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGR
AYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIF
EEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRILSALDN
QQAIDLLIKQLKKTKSNAEFLMQVASSAPMAGTEKEEDYS
NT seq 2283 nt   +upstreamnt  +downstreamnt
gtgacaaccacagacaacaccgcagcgaatcagggtgaactgaccgccctccgactgccg
gatctgcgcaaaattgccgccgaccttgggctcaagggaacctcggcattgcgtaagggc
gatctgatcaacgccatctctgcagcccgcgagggtaagccaaccgcagctgcgaagaag
acttccccacgcaaggccccatcacgcacccgtgtgacacagccttccgcaccggttgag
caagcacaagaagctcccgcgcaaacttcaactgcacctgcttcagcaccatctgaagag
actcccgcagctcccgctcgtcgtggacgtcgccgtgtaaccaccaccgcgaccacccca
gagccagcagcgcctgcacaatcccagcctgcagaagctcaaccagcacagactcaggct
gcacagcaagaagaacttcctgttgcagcgaaggagtccgcaccagctacagaaaatact
cagggccaatcccagggccaagctcagggcgatgagcacgatgatcgctttgagtcccgt
tctgctgcacgccgagcacgccgcaaccgtcagcgccagatccaccgcgatggcgatgac
aatgcgaatgcaaacacagagtctgagcagaacacccctgcccagaacgcaaccgcacag
gctgagtctgagcagactgcacctcctgcacaggctgaagcagctgagcagaaccagaac
gataacagcgagtcctccgagaaccgcagcgataactaccgcaacaacaatcgtcgttcc
cgcaacaaccggaacaatcgcaattaccgcgataacaacgagtcctctgataatgcagga
cagtccagcaatgatgatgccgacaacaatcaggcacggtctgaggacaataacgacgat
cgccgttctcgtaataaccgtaacaacgaccgcaatgatcgtaacgatcgcaatgaccgc
gacaaccacaacgacgacaacgatgatcgccgcaaccgtcgcggacgccgtaatcgccgt
ggacgcaacgaccgtaacgatcgcgacaaccgagataaccgggataaccgcgacaacagc
aacgatggcgacaacaaccagcaagatgagctgcagcaggtagcaggcatcctggacatc
gtggaccataacgtcgcattcgtgcgcaccaccggttaccacgctgcaccttctgacgtg
tttgtcagcaaccagctgatccgccgtatgggtcttcgttccggtgacgccattgaaggt
caggttcgtatgaaccagggtggtggcaaccacaacaaccatggtcgcaaccgtcagaag
tacaacaacttggtgcgcgtggagatggttaacggtcttcctgcggaagagactcgcaac
cgtcctgagttcggcaagctgactcctctgtacccgaaccagcgtctgcgtttggaaact
gagcagaagattcttaccactcgtgtgatcgacttgatcatgcctattggtaagggacag
cgtgctttgattgtgtcgccacctaaggctggtaagaccacgatcctgcagaacattgcg
aacgctatttccaccaacaacccagagtgctacctcatggttgttttggttgatgagcgt
ccggaagaagttactgatatgcagcgctccgtcaacggcgaagtgattgcttctactttc
gatcgtccaccatcagagcacactgcggttgctgagctggcgattgagcgtgcgaagcgc
ctggtggagcagggccaggacgtcgttgttctgcttgactccattactcgtttgggccgt
gcgtacaacaacagctcacctgcatcgggacgtattttgtccggtggtgtggattccaat
gcactgtacccgccgaagcgtttcttgggtgctgctcgaaacatcgaaaatggtggatct
ttgaccatcatcgcaactgccatggtggagaccggctctgctggtgacaccgtgatcttc
gaggagttcaagggcactggtaacgctgagctgaagctggatcgtaagatctctgagcgc
cgcgttttcccagctgtggatgttaatccttctggtactcgtaaggatgagctgttgctc
aacccggacgaggctcgcattatgcacaagctgcgtcgtattctgtctgcacttgataat
cagcaagccattgatctgttgatcaagcagctgaagaagaccaagtccaacgcggaattc
ctcatgcaggttgcttccagcgctccaatggcaggcacagaaaaagaggaggattactcc
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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