KEGG   Capnocytophaga gingivalis: CGC50_01065
Entry
CGC50_01065       CDS       T05260                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cgh  Capnocytophaga gingivalis
Brite
KEGG Orthology (KO) [BR:cgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgh03032]
    CGC50_01065 (topA)
   03400 DNA repair and recombination proteins [BR:cgh03400]
    CGC50_01065 (topA)
Enzymes [BR:cgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CGC50_01065 (topA)
DNA replication proteins [BR:cgh03032]
 Prokaryotic type
  DNA Topoisomerases
   CGC50_01065 (topA)
DNA repair and recombination proteins [BR:cgh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CGC50_01065 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4
Other DBs
NCBI-ProteinID: ATA85869
UniProt: A0A250FL39
Position
complement(207759..210299)
AA seq 846 aa
MAKNLVIVESPAKAKTIEKFLGSDYKVMSSYGHIADLPDKELGVDVAHGFKPQYLVAVDK
RNLVKALKEEVKKADTVWLASDEDREGEAIAWHLSEELKLSQEKTKRIVFNSITKSAIEH
AIKNPRGIDYNLVNAQQARRVLDRLVGYELSPVLWKKIRKGLSAGRVQSVSVRLIVERER
EIQDFQSEVSYKITAEFLTKEGKLIKTYTHKSFPTQEAAKAFLEKNIGATFSVGSLETKP
AKKSPAPPFTTSTLQQEAARKLHFSVSKTMQLAQRLYESGLITYMRTDSVNLSPEALSAA
KQEIVKSYGEAYSKTRQYTSHSKGAQEAHEAIRPTDMAAHTVRAEADQVRLYELIWKRTI
ASQMSDASLERTQVKVNASTHTEPFIGSGEVIVFDGFLKVYLEGKDDEEEEDEGMLPAMK
VGESLTSKHITATQRFTRPPFRYTEASLVKKLEELGIGRPSTYAATISTIQNRGYVERSS
LEGESRPYLQLSLIKNEIKEKKLTENVGADKGKLIPTDIGMIVNDFLITHFATIVDYNFT
AKVEEEFDDIASGKEDWAKMVGRFYDTFHPTVAHVEQNAVRETGERILGTDPATGKPVSV
RLGRYGAMVQIGTVEDEEKPRFASLLPHQTIDSITFEEAMKLFELPRKLGVYQGKEVESN
IGRFGPYIRFGDTFISLDKSLDVFSITFDEAKEVIDQKQKADAPISVYDGKEVTKGTGRF
GPFIKWNNMFISVSKKYDFEHLSQSDIIFLIEEKLKKESEKVVKEWPEEGIHIEKARWGR
YHLLKGKTKVELSKDTDIEAFTLAEAQSLLATKEKPKKAPATKKATTAKKAPAKASKTVA
KKTVKK
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggcgaaaaatttagtaattgtagagtctcctgccaaggcaaaaactattgagaagttt
ttgggcagtgattacaaggtgatgtccagttacggacatatagccgacctccctgataag
gaattaggggtcgatgtagcacatggattcaagcctcagtacttggtcgctgtcgataaa
agaaaccttgtaaaagccctcaaagaagaagtgaagaaagccgatactgtatggttggct
tccgatgaagaccgtgagggagaagccatagcttggcatttgtctgaagagcttaaactc
tctcaagaaaagaccaagcgtattgtcttcaactccattactaagtccgccatagagcat
gctataaagaaccctcgaggaattgactataatttggtcaatgcccagcaggcacgccgt
gtacttgaccgcttggtagggtatgaactatcccctgtattgtggaagaaaatccgtaaa
gggctctccgcagggcgtgtacagtccgtatcggtacgccttattgtagagcgcgaacgc
gagatacaggatttccaaagtgaagtctcttataagatcactgctgagttccttactaag
gaaggaaagctgatcaagacctatactcataagtcctttcctacccaagaggcagccaaa
gctttcttagagaagaatataggtgctactttttctgtgggaagtctcgagaccaagcct
gctaagaaatctccagcacctccctttactacctctaccctacagcaggaagccgcccgc
aagctccacttctctgtatccaaaaccatgcaactggcacaacgcctttacgaatcaggg
cttatcacctatatgcgtaccgatagtgtaaatctatcccctgaggcactctctgctgcc
aagcaggagattgtcaagtcttatggagaagcttacagtaagacccgccaatatacctcc
cactccaagggggctcaggaagcccatgaggctatccgccctaccgatatggccgcgcat
actgtaagagcagaagctgatcaagtacgcctatacgaactaatatggaaacgtaccatt
gcctctcagatgagtgatgcctctttggaacgtactcaggtgaaggtcaatgcttctacc
cacacagagccttttataggtagtggcgaggtgatcgtatttgacggattcctcaaggta
tatctcgagggtaaggacgacgaagaggaggaagacgaaggcatgctacctgctatgaaa
gtaggggagtccctcacgagcaaacatattacagctacccagcgctttacccgtccgccc
ttccgctatacagaagcctccttggtcaagaagttggaagagctgggtattggccgtcct
tctacctatgcggctaccatctctaccatacagaaccgaggctatgtagagcgtagtagc
ttggagggcgaaagccgtccttacttacagctctccttgatcaaaaatgaaatcaaggaa
aagaaactcacagagaatgtaggtgctgataagggtaaactcattcctaccgatataggt
atgatcgtcaatgactttttgatcacccactttgctaccattgtggattacaattttaca
gccaaagtcgaagaagagttcgatgatattgcctcaggcaaagaagactgggcaaaaatg
gttggccgtttttacgatacttttcatcctacggtagcccatgtagagcaaaatgcagtg
cgcgagaccggagagcgtatcttaggtaccgatcctgccactggtaagcctgtgagtgta
cgccttggtcgctatggtgctatggtgcagattggtactgtggaggatgaggaaaaacca
cgctttgctagcctcttgcctcaccagaccattgatagtatcaccttcgaggaagctatg
aagctcttcgaactcccccgtaagttgggcgtatatcagggtaaggaagtagaatccaac
ataggccgctttggcccttatatccgctttggtgatacctttatttccttggataagtcc
ttggatgtcttttccataacctttgacgaggctaaggaagttatcgaccaaaaacagaaa
gccgatgcccccatctctgtatacgatggtaaggaagttaccaagggaacagggcgtttt
ggcccttttatcaagtggaacaatatgttcatcagcgtaagcaagaagtatgattttgag
cacctctcccagagtgatatcatctttttgatagaggagaaactcaagaaagaatccgag
aaagtagtcaaggaatggccagaggaaggtatccatatagaaaaagcccgctgggggcgc
taccacctccttaaaggaaagaccaaagtagagctcagcaaggatacagatatagaagcc
tttaccttagccgaagcccaaagccttttggccactaaggaaaaacctaagaaagcccct
gctactaagaaggcgaccactgccaagaaagcccccgccaaagcctctaagactgttgca
aagaaaacagtgaagaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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