KEGG   Cryptococcus gattii: CGB_D3040W
Entry
CGB_D3040W        CDS       T02232                                 
Name
(RefSeq) 20 kDa nuclear cap binding protein (ncbp)
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cgi  Cryptococcus gattii
Pathway
cgi03013  Nucleocytoplasmic transport
cgi03015  mRNA surveillance pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_D3040W
  09122 Translation
   03013 Nucleocytoplasmic transport
    CGB_D3040W
   03015 mRNA surveillance pathway
    CGB_D3040W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_D3040W
   03041 Spliceosome [BR:cgi03041]
    CGB_D3040W
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CGB_D3040W
Spliceosome [BR:cgi03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CGB_D3040W
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 10191233
NCBI-ProteinID: XP_003193465
UniProt: E6R5W3
Position
D:join(679009..679068,679121..679217,679270..679315,679369..679604,679660..679901)
AA seq 226 aa
MAQVVPSLDHPSSYRDSRSEIDRETERRLLAQSSTLYIGNLSFYTTETQMYQLFSTCAKP
EIGGGIKRIIMGLDRNTKTPCGFAFVEYFLHEEAVDCMRYISGTKLDERVIRCDLDPGYK
EGRQFGRGRSGGQVRDEFRQEYDSGRGGWGHQRLEEERRRQEQDRLRSQMQFDTYAAVGG
LGLAGADVPRGEDFFADRQKRGRSEDEEEIERREDEKRLRGERDDE
NT seq 681 nt   +upstreamnt  +downstreamnt
atggcacaagtcgtaccctccctcgaccacccatcttcctaccgcgatagcaggtcagag
attgatcgagaaactgagcgccgacttttggcccagtcgagcacactctacattggtaac
ctcagtttctacaccacagagacccaaatgtatcaactattctcgacttgtgccaaaccc
gaaatcggcggaggtatcaagagaattataatgggtctcgaccggaataccaagacgccg
tgtggtttcgctttcgtcgagtactttcttcatgaagaagcagtcgactgtatgcgatac
atctctggcactaagctcgatgagcgagtaatcagatgtgatttggatccgggatacaaa
gagggaagacaatttggtcgaggacgaagtggtggacaggttcgagacgagtttagacaa
gagtacgacagcggacgaggcggctggggccatcaacgtttggaggaagaaagaaggagg
caagaacaagacagactgcgttcgcaaatgcagttcgacacctatgctgctgttggtggc
cttggtcttgcaggcgccgacgttcctcgaggtgaagacttctttgcagaccgacaaaag
cgtggcagaagtgaagacgaggaggagattgaaagacgtgaagatgaaaagcgtttacgg
ggcgaacgagacgatgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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