KEGG   Cryptococcus gattii: CGB_G2160W
Entry
CGB_G2160W        CDS       T02232                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
cgi  Cryptococcus gattii
Pathway
cgi03013  Nucleocytoplasmic transport
cgi03015  mRNA surveillance pathway
cgi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CGB_G2160W
  09122 Translation
   03013 Nucleocytoplasmic transport
    CGB_G2160W
   03015 mRNA surveillance pathway
    CGB_G2160W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgi03019]
    CGB_G2160W
   03041 Spliceosome [BR:cgi03041]
    CGB_G2160W
Messenger RNA biogenesis [BR:cgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CGB_G2160W
    TREX complex
     CGB_G2160W
Spliceosome [BR:cgi03041]
 Complex C
  Other components
   EJC/TREX
    CGB_G2160W
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CGB_G2160W
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded PHM7_cyt Arm-DNA-bind_5
Other DBs
NCBI-GeneID: 10188974
NCBI-ProteinID: XP_003195162
UniProt: E6R979
Position
G:join(418720..418758,418830..419048,419100..419229,419267..419290,419539..419711,419760..419786)
AA seq 203 aa
MTSKMDIDRPLDEIIATKAKPRRPRQGGAGARRGGTASGATGATGARARYASTVPKTVAA
PQPFSAEVFKIIISNLPSDVTDAAVRDLMQSTVGPVKSVQMSYTATGKSTGIATVVFKNK
GDARKAHASYHNRMIDNQRPMKVELAIDPNQARSSLVNRVAPAPAQPQKKRAPASKPRNP
RPAKKTAEQLDAEMAEYKQSSTA
NT seq 612 nt   +upstreamnt  +downstreamnt
atgacttccaaaatggacattgaccgacccctcgatgagattatcgctaccaaggcgaag
ccacgtcgccccagacaaggaggtgcaggtgcccggcgcggagggactgcgtctggcgcc
actggcgccactggtgctcgagcgagatacgcttccacagttcccaagactgtcgccgct
cctcaaccatttagtgccgaagtgttcaaaattatcattagcaatttgcccagcgatgtg
actgacgccgctgttcgagatctcatgcagtctactgtcggacctgtcaagagcgttcag
atgtcctacaccgccacaggcaagagtactggtattgccacggtagtgttcaagaacaag
ggcgatgcgaggaaggctcatgcctcttatcacaataggatgatcgacaatcaacgccct
atgaaggttgagcttgccattgaccccaaccaggcgcgatcttccctcgttaatcgggtt
gcgcctgctccagctcagcctcaaaagaagcgtgctcccgccagcaagcctcgcaacccg
cgcccagccaagaagactgctgaacagttggatgctgagatggcggaatataagcaatct
tcgactgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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