KEGG   Cryptococcus gattii: CGB_H3560C
Entry
CGB_H3560C        CDS       T02232                                 
Name
(RefSeq) vacuolar protein sorting 41
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
cgi  Cryptococcus gattii
Pathway
cgi04138  Autophagy - yeast
cgi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    CGB_H3560C
   04148 Efferocytosis
    CGB_H3560C
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgi04131]
    CGB_H3560C
Membrane trafficking [BR:cgi04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    CGB_H3560C
SSDB
Motif
Pfam: Clathrin Vps39_1 Vps39_2 Mcl1_mid WD40 zf-C3H2C3 zf-RING_2 Spore_coat_CotO
Other DBs
NCBI-GeneID: 10185584
NCBI-ProteinID: XP_003195783
UniProt: E6RAZ5
Position
H:complement(join(776774..777090,777140..777452,777506..777625,777682..777759,777810..777920,777975..778257,778317..778444,778491..778583,778638..778741,778794..779475,779526..779782,779842..779983,780037..780127,780178..780605))
AA seq 1048 aa
MPSSNHSSASSPSKPVSVHDTTEAGPSVQSQRPRISSVSSASSSASRKGKDRAVVADGDD
GDSELSGTGSEEEDSEEEDDDDDDDDEEEKEEEQRSERSGHESENKDRLSINENPSEHDD
EQVEDEEEEEDSEESSDEEEEEPALKYSRLKGRIPDILAKDTAATISVSPRSIALGTHNG
MVHTLSYEGVKINSFRPHAASVTCLRMDESDDFVATSSVEGRVVIHSLSTPESYAFDYKR
PMRAVALEPDFAKKKSRAFVCGGMAGNLILQEKGWMGYKEQILHSGEGPIWAIEWRRNLI
AWANDLGVKIYDTNTGQRIGYIDRGASAPRAELFKCTLQWKDDQTLLIGWADHIKIVRVR
SRPSSQASGNLPPLTVEMTAIYQVDCMVSGIAPFGGSYVILAYVAPDRYENEATDDPIEQ
RRKAANRPELRIIDKGEETNADALSLANYHMYGCNDYSLVKSQKPGEEAFLVISPADVIV
VRPRDEADHIEWLVERERFQEALEAAEEMQKKHGSAFDIKGIGLKYMRHLVSKEQFEPAA
ELAPKILEHDATAWEKWIDIFVQHQQLPTIIPYIPTQKPRLGRRVYEMVFTHLLINDKQA
LPKVITSWPTEIYDLTTLVEAIQGELQASHDDPILLECLGELYLINRLPAKALPYFLRIR
KPYVFELIREHNLFTAIRDQALQLITFDQERKKARSKVENQRGEKTDDTEIESVEGDKSK
HGAAIQLLVDHVHSIPIDRVVHQLETKPQYLYMYLDVLLDKDPQYSLPYGDRMVELYAAY
DVDRLMPFLRTSNFYDLEKAYAVCKERDYVPEMVFLLGRMGNNKQALMLLIERLGDVERA
IEFAKEQADEDLWEDLLAYSESRPDFIRALLEHVGAEINPIRLIGRIRNGMEIPGLKPAL
VKILQASNLQVSLLEGCQHILNGDCAGLMGQLQKGQTNGLKASSTSTCAVCSKPAFANQP
SLVLIYLCRHLVHAECVLPEGIDLPVRQENASVAYLLADEGRMGRHGGAAWKTRNLGARL
GYAAAVRVRVKQCPVCEQAGTLDKGHLA
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgccctcgagcaatcactcgagtgcctcatctccaagcaagccagtgtctgtccacgac
actacagaagctggtccctccgtccaatcacaacgacctcgcatttcgtccgtttcctcc
gcctccagctcagcctctcggaagggcaaagaccgagcagtagtggccgatggagatgat
ggggatagtgaattaagtggaaccgggagtgaagaggaagatagcgaggaggaggatgat
gatgatgacgatgatgatgaggaggagaaagaggaggaacagcgctctgaaagaagcgga
catgagtcggagaacaaagacagattaagcatcaacgaaaacccaagtgaacatgatgat
gaacaagtggaagatgaggaagaagaagaagatagtgaggaatcgagtgacgaagaggag
gaagaaccagcacttaagtatagcagattaaaaggccggataccagatatcttagccaaa
gacactgcagctaccatatcggtgtctccaagatctattgctctaggaacccataacggg
atggttcacaccttgagttatgaaggcgtcaaaatcaactctttcaggccgcacgcagcg
agtgtaacatgtttacgtatggacgagagcgacgactttgttgcaacgtccagtgttgaa
ggccgtgtggtgatccattctctcagcacacctgaatcttatgcctttgattacaagcgt
cccatgcgtgccgttgcccttgaaccggattttgccaaaaagaaatctagagcattcgtt
tgtggtggtatggctggcaacttgatcctgcaggagaagggatggatgggatacaaagaa
caaattcttcattctggagagggacctatctgggcgattgaatggaggcggaacctcata
gcttgggctaatgaccttggagtgaagatctacgataccaacaccggtcaacgaataggt
tacatcgatcgcggtgcatctgctcctcgtgccgagctcttcaaatgcactcttcagtgg
aaagacgatcagactcttttaataggttgggccgatcacatcaagattgttcgcgtccgc
tcccgtccttcaagtcaggcttctggaaatcttccccccttgacagtcgagatgacggcc
atctatcaagttgattgcatggtctctggcatcgcgcctttcggaggctcatacgttata
ctcgcatacgttgcacctgacagatatgaaaacgaggctacggatgatcccatcgaacag
cgtcggaaggcggcaaatcgaccagaactgaggatcatcgataaaggcgaagaaactaat
gctgacgccctgagtctagccaattatcacatgtatggctgcaatgactattctctggtc
aagtctcaaaaacctggagaagaagcgttcttggttattagccccgcagacgtcatcgtg
gttagaccaagagatgaggctgaccatatcgagtggctggtggaaagggaaagattccaa
gaggcgttggaagcagcggaggagatgcagaagaagcatgggagtgcattcgacatcaag
ggaattgggttgaagtatatgcggcaccttgtgagcaaagagcaatttgaaccagctgca
gagctcgcaccaaaaatcttggaacatgatgcaacggcatgggagaagtggatagacatt
tttgtgcaacatcaacagttgcctaccatcattccatatatcccgacgcaaaagcctagg
ctaggaagacgtgtgtatgagatggtgtttacgcatcttttgatcaacgacaaacaggct
cttccaaaagtcatcacatcgtggccgacggagatttatgatctcacaacgctggttgaa
gccatccagggagagttacaggcttcccatgatgacccaattttattagagtgcctgggt
gaattgtatctcatcaaccgcctccctgctaaagctcttccatacttccttcgtatccgc
aaaccatatgtctttgagcttattagagaacacaatcttttcaccgcgattcgagaccag
gctctgcaactgattacctttgatcaagaacgaaagaaagctcggagcaaagtggagaac
caaagaggcgagaaaaccgatgatacagagatagagagtgtagaaggcgacaagagcaag
catggagctgcgattcaacttctcgttgatcatgtccactctatccccatcgatagagtt
gtgcatcaacttgaaactaaaccccagtatttgtacatgtatttggacgtccttctggat
aaagatccacagtactctttaccgtatggcgataggatggtcgagctctatgctgcgtac
gatgtcgacagactgatgcctttcttgcgtacaagtaacttctatgaccttgaaaaagct
tatgctgtatgtaaagagcgtgactacgttccagagatggttttcctcctcggcaggatg
ggtaacaataagcaagccttaatgcttcttattgagcgccttggcgatgtcgaaagggcg
attgagtttgctaaagagcaagccgatgaggatctttgggaagacttgttggcttattcg
gaaagtcgaccagacttcatccgcgctcttctggagcatgttggcgcagagatcaaccct
attcgactgattggtcgcatccgcaatggcatggagatccctggactgaaaccggctttg
gtcaaaatcttgcaagcatccaaccttcaggtctcattgctggaaggctgtcaacatatt
ctaaatggagactgtgccggtctgatgggtcagctacaaaagggtcaaaccaatgggctg
aaagcatcatctacaagcacatgtgcagtgtgttcaaaacctgcctttgcgaaccagcca
tcccttgtcttaatttacctctgtcggcatcttgttcatgcggaatgtgtgcttcctgaa
gggatagacctaccagtacggcaagaaaatgcttcagttgcgtatttactggcagatgag
ggccgtatgggccgccatggaggggctgcgtggaagacaaggaatttgggggccagattg
ggttatgcagcagcagtgagagtccgagtcaagcaatgcccagtgtgtgagcaagcaggg
acattagataaagggcatttggcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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