KEGG   Cryptococcus gattii: CGB_N0500W
Entry
CGB_N0500W        CDS       T02232                                 
Name
(RefSeq) DNA replication factor
  KO
K10756  replication factor C subunit 3/5
Organism
cgi  Cryptococcus gattii
Pathway
cgi03030  DNA replication
cgi03410  Base excision repair
cgi03420  Nucleotide excision repair
cgi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGB_N0500W
   03410 Base excision repair
    CGB_N0500W
   03420 Nucleotide excision repair
    CGB_N0500W
   03430 Mismatch repair
    CGB_N0500W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgi03032]
    CGB_N0500W
   03036 Chromosome and associated proteins [BR:cgi03036]
    CGB_N0500W
   03400 DNA repair and recombination proteins [BR:cgi03400]
    CGB_N0500W
DNA replication proteins [BR:cgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CGB_N0500W
  DNA Replication Termination Factors
   ELG1-RFC complex
    CGB_N0500W
Chromosome and associated proteins [BR:cgi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CGB_N0500W
DNA repair and recombination proteins [BR:cgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CGB_N0500W
  Check point factors
   HRAD17(Rad24)-RFC complex
    CGB_N0500W
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 DNA_pol3_delta AAA_14 AAA_11 DUF815 AAA_30 AAA_assoc_2 AAA_16 AAA_22 RuvB_N AAA_5 AAA_3 AAA_18 AAA_19 ResIII AAA_24 DEAD AAA_7 AAA_28 ATPase_2 bpMoxR nSTAND3 Mg_chelatase Viral_helicase1 RNA_helicase MCM AAA_25 TIP49
Other DBs
NCBI-GeneID: 10186380
NCBI-ProteinID: XP_003197438
UniProt: E6RFV7
Position
N:join(163241..163407,163477..163541,163610..163666,163737..163893,163962..164035,164116..164275,164371..164452,164546..164675,164809..164941,165086..165182)
AA seq 373 aa
MAESMDIDTPIPSPASAVPPRNAMAALMANAKGKGKEIAPTAADQKAVDDKEGLPWVEKY
RPVSLDDVVSHKDITGTIEKFIEAGRLPHLLFYGPPGTGKTSTVLALARRLYGSAYKKHI
LELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMTQAAQSALRRVIEQHTK
NVRFCILCNYVNKITPAIQSRCTRFRFSPLPEKEIQVKVDEVVQKEGVNLTEDGRDALLK
LSRGDMRRALNVLQACHAAYDTVDETAVYNCTGNPHPRDIERVVQSMMADEFGTAYSLIT
SLKIEKGLALQDLIAGAYEFLDTVELPKQSRIYLLDHLGSTEHRLSLGGSEKMQLTALLG
AFKVAVELSQRKI
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcagaatcaatggacatagacacacccattcccagtccagcgtctgccgtcccacct
cgaaacgcgatggcggcgctcatggcgaacgcaaaaggaaaaggaaaggagattgctccc
acagctgcggatcaaaaggccgtggatgacaaagagggtcttccttgggtggagaagtac
aggcctgtttcgctcgacgacgttgtctcgcacaaggatattaccggtaccatcgaaaag
tttatcgaagccggacgactaccgcatctcttattctacggacctccaggtaccggtaaa
acatccaccgtccttgcccttgcccgccggctatatggatctgcatataagaaacatatt
ctcgagttgaacgcttcagatgatcgagggattgatgtagtgcgagagcagattaagaat
ttcgcaatgaccaaggtgctattctcaaaaggtttcaagttggtcattttagatgaagcg
gatatgatgacccaagcagctcaatctgcacttcgtcgagtaattgaacaacacactaaa
aacgtccgattctgtattctctgcaactatgtcaacaagatcacccctgctatccaatct
cgatgtaccaggtttaggttctcacctctgcctgaaaaggaaatccaagtcaaggtggat
gaagttgtgcaaaaagaaggagtgaacctaacagaggatggtcgggatgcgcttctcaaa
ttatctcgaggcgatatgcgacgagccctcaacgtcctccaggcatgtcacgcagcgtac
gatacagtcgatgaaacggccgtatacaactgtacagggaacccgcacccgagggatatt
gagcgtgtggtacagagtatgatggctgatgagtttgggactgcttattcccttatcacg
tctttgaaaattgaaaaaggtcttgcactgcaagatttgattgcgggcgcatacgaattt
ttagatactgtcgaactgccaaagcaaagtaggatatatttgctggatcacctgggaagt
acagagcatcgactatcgttgggcggttcagagaagatgcagctcacagcattgttggga
gcgtttaaagtcgcagtagagctttctcagagaaagatttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (31)   
   Pfam (31)   
All databases (47)   

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