KEGG   Corynebacterium glutamicum ATCC 21831: AR0_11325
Entry
AR0_11325         CDS       T03361                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cgj  Corynebacterium glutamicum ATCC 21831
Pathway
cgj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AR0_11325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgj03019]
    AR0_11325
   03009 Ribosome biogenesis [BR:cgj03009]
    AR0_11325
Enzymes [BR:cgj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     AR0_11325
Messenger RNA biogenesis [BR:cgj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AR0_11325
Ribosome biogenesis [BR:cgj03009]
 Prokaryotic type
  rRNA processing factors
   AR0_11325
SSDB
Motif
Pfam: RNase_E_G IF2_N S1 Cytidylate_kin PCB_OB
Other DBs
NCBI-ProteinID: AIK88576
Position
complement(2384310..2387375)
AA seq 1021 aa
MPNNKAVEAEISPSAVLAAEFDRDSLSEKTRVHQLAKRLGMVSKDVVVALDGIGLVKVAQ
SNLSKEEVEKLLDALSQPVLNAAPAAVPDVEPVEKIRRRVEKNVENEIHQIEEKVERELA
AVAQPTDFEAAAREEATAELLEDIVPEITPAPVEAPVYTPIFVAPAVVPTENVQDTDDEQ
ARERTARKRRGRRGTGRGRGAEAETVTEVSEEASTSEVEEVNEPIGIKGSTRLEAQRRRR
TEMREENKKRRHVVSTQEFMERRESMERRMIVRERQRHDHPGLVTQVGVLEDDQLVEQFV
TSDAQMSMVGNIYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGEVDWKAAGLGGRGRRIEQ
ALKAGDQVLVQVSKDPLGHKGARLTTQISLAGRYLVYVPGGRSAGISRKLPGPERKRLKE
ILGRVVPAQGGTIIRTAAEGVSEENIAADVNRLHTLWEQIKERTAKEKKSRGSKPITMYE
EPDMLVKVIRDLFNEDFTSLIVDGDRAWNTVRAYIQSVAPDLVSRVEHFDRADFDGKDAF
EAFDLNTQLEEALSRKVNLPSGGSLIIDRTEAMTVIDVNTGRYTGKGGGNLEETVTLNNI
EAAEEIVRQMRLRDLGGMIVVDFIDMVLPENQELVLRRLNEALENDRTRHQVSEVTSLGL
VQMTRKRIGAGLLETFSSPCEHCEGRGIIVHVDPVDTVDERVEAKAEERSRRHQRSNSTN
KAAAEHPMVVAMRDLVESDEHDLDQEFEELAASVIVLDDSDLDDVVNDKLDEPERILAES
TVEPEEGPRRRARRQRQESAADDIAAIAAAAVDIASEEDPDEPSGSSYVSDFEAEPIAPV
VEKAAEPVAEPTADYEKARAEFEASPRRRRKTRGNSRSDHAPKPEDFAPVVEEVAETPVK
TPARKAPRRNRPSELSSGAPSSAPSTRNRRRAVRRQLVEAPETVVEIAPEAAPEQVAEPQ
VEFDQPDNRRKRRRAVRVTAAPVEKKVASTSNARAPKKEPQAASTTNPGRRRRATRRGPR
S
NT seq 3066 nt   +upstreamnt  +downstreamnt
gtgccaaataacaaggcagtagaagcagaaatctctccctcggctgtgctggccgcggaa
tttgatcgagattcattgagcgaaaaaacccgcgtacatcaactggccaaacgacttgga
atggtttccaaggacgtcgttgttgcgctcgatggcatcggcctggtcaaggttgcgcag
tcaaacctgagcaaagaagaagtagaaaagcttctcgacgccctgtctcagcccgtactc
aacgccgccccagctgccgtccccgacgttgaaccggtggagaagattcgtcgacgcgtt
gagaagaatgtggaaaatgaaatccaccaaatcgaagaaaaagtagagcgcgaactcgcg
gcagtcgcgcaacctaccgacttcgaggcggcagcccgcgaagaagccactgcagaactg
ctggaagatatcgtcccagagatcaccccggcgccggtggaagcacctgtgtacacgccg
atctttgtggcacctgcagttgtacctactgaaaacgtccaagacaccgacgatgaacag
gcccgcgaacgcacggcgcggaagcgccgtgggcgtcgtggcaccggccgcggacgtgga
gctgaagctgaaaccgtcaccgaagtgagtgaggaggcgtcgacaagcgaagtagaagag
gtaaacgagccaatcggaattaagggctccactcgcttggaggcgcaacgccgccgtcgc
acggaaatgcgcgaagaaaacaaaaagcgccgccatgtggtgagcacccaggagttcatg
gaacgccgtgaatcgatggaacgtcgcatgattgtgcgcgagcgccaacgccatgatcac
ccaggtctggtcactcaggttggtgtgctggaagacgatcagctggttgagcagtttgtt
acctctgatgcgcagatgtccatggtgggcaatatttatctggggcgcgttcaaaatgtg
ctgccaagcatggaagctgccttcattgacattggaaaaggtcgcaacggtgtgttgtat
gccggcgaagtcgactggaaagctgctggacttggcggacgtggacgtcgcattgagcag
gcgctgaaagccggcgaccaggttctcgtccaggtctccaaggatccattgggccataag
ggtgcgcgtttgaccacccaaatttccctggcgggacgttacctggtgtacgttccaggt
ggacgcagcgctggcatttcccgcaaactgcctggacctgagcgcaagcgtctgaaggaa
atccttggccgcgttgtcccagcgcagggtggaaccatcatccgaactgctgctgaaggt
gtgtcggaagaaaacatcgcagctgacgtgaaccgtctgcacaccctgtgggagcagatc
aaggaacgcactgcgaaggaaaagaagtcccgcggttccaagccgatcaccatgtatgaa
gagccagacatgctggtgaaggtgatccgtgacctcttcaatgaagatttcacctcactg
atcgttgacggcgaccgtgcctggaacaccgtgcgtgcctacatccaatcagtcgctcct
gatttggtgtcccgcgtggaacacttcgatcgcgcagactttgacggcaaggatgctttc
gaagcatttgacctgaacacccagcttgaggaagcgctgtcccgaaaggtgaacctgcca
tcgggtggatcgctgatcatcgaccgcaccgaagccatgacggtgatcgatgtgaacacc
ggacgctacaccggcaagggtggtggcaacttggaagaaaccgtcacgctcaacaacatt
gaagctgccgaagaaatcgtgcgccaaatgcgcctgcgtgatctcggtggcatgatcgtt
gtcgacttcatcgatatggtgctgccagaaaaccaagaattggtcctgcgccgactcaat
gaagcgctagaaaacgatcgcacccgccaccaagtctctgaggtaacctcactgggactt
gttcagatgacccgcaaacgcatcggcgcgggcctgctggaaaccttctcttcaccgtgt
gagcactgtgaaggccgaggcatcatcgttcatgttgatccagtagacaccgttgacgag
cgcgttgaggcgaaagcagaagagcgtagccgtcgtcaccagcgttccaatagcactaac
aaggcagctgcggagcacccgatggttgttgccatgcgtgatctcgtggaaagcgatgaa
cacgatctggatcaagaatttgaggaactcgctgcatcagtgatcgtcctcgatgactcc
gatctagatgatgtggtcaacgacaagctcgacgagcctgagcgtattcttgctgaatcc
accgtggaaccagaggaaggaccacgcaggagggcccgccgtcaacgtcaggaatctgct
gcggatgatattgcagcgattgcagctgctgccgtggacattgcttctgaagaagaccct
gatgagccttcgggatcgtcgtatgtgtctgactttgaggcagagcctattgcacctgta
gttgagaaggctgctgaacctgtggctgagccaaccgctgattatgaaaaggcacgtgcc
gaatttgaggcaagcccacgcaggcgccgcaagactcgtggcaattcacgttcggatcat
gctccaaagccagaggatttcgcacctgtggttgaagaggttgctgagactccagtgaag
acacctgcgcggaaggctccacgccgtaaccgtccaagtgagctcagttccggtgcgccg
tcctctgcaccatcgaccaggaaccgtcgccgcgcagtgcgccgtcaactggtggaagct
cctgagaccgtcgttgagatagcacctgaagcagcaccagaacaggttgcagagcctcag
gttgaattcgaccagccagacaaccgccgaaagcgtcgtcgtgctgtgcgcgtgacagcg
gcgccggtggagaagaaggtggcgtcgacaagcaatgcgcgggcgccgaagaaggaacct
caggcggcgagcaccaccaacccaggccgccgtaggcgggctacccgacgaggcccacga
agctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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