KEGG   Nakaseomyces glabratus: CAGL0M00874g
Entry
CAGL0M00874g      CDS       T01024                                 
Name
(RefSeq) uncharacterized protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03018  RNA degradation
cgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CAGL0M00874g
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAGL0M00874g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    CAGL0M00874g
   03041 Spliceosome [BR:cgr03041]
    CAGL0M00874g
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAGL0M00874g
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CAGL0M00874g
Spliceosome [BR:cgr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    CAGL0M00874g
 Complex C
  U2 snRNP components
    CAGL0M00874g
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 9488055
NCBI-ProteinID: XP_002999599
UniProt: B4UN56
Position
M:96799..97056
AA seq 85 aa
MSLSTPLDLLKLNLDERVYVKLRGARAMEGVLQAFDSHCNIVLSDAVETIYELVDGELKS
QERASEMIFVRGDSVTLITAVSEEE
NT seq 258 nt   +upstreamnt  +downstreamnt
atgtctttgagcacaccgttggatcttttgaagctcaatttagatgagagagtgtatgtg
aagctgcgtggtgcccgtgctatggagggtgtgctgcaggcgtttgactcgcattgcaat
attgtgctgagcgatgcagtagagaccatatatgagctagtggacggtgaattgaagagt
caagagcgggcctctgagatgatatttgtaagaggtgattctgtaactctaataacagca
gtttccgaagaagaataa

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