KEGG   Corynebacterium glutamicum B253: SB89_06990
Entry
SB89_06990        CDS       T03668                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cgx  Corynebacterium glutamicum B253
Pathway
cgx03030  DNA replication
cgx03410  Base excision repair
cgx03420  Nucleotide excision repair
cgx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cgx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SB89_06990
   03410 Base excision repair
    SB89_06990
   03420 Nucleotide excision repair
    SB89_06990
   03440 Homologous recombination
    SB89_06990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgx03032]
    SB89_06990
   03400 DNA repair and recombination proteins [BR:cgx03400]
    SB89_06990
Enzymes [BR:cgx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SB89_06990
DNA replication proteins [BR:cgx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SB89_06990
DNA repair and recombination proteins [BR:cgx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SB89_06990
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SB89_06990
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_lambd_f DNA_pol_A_exo1 HHH_5 HHH_2 Glyco_transf_4
Other DBs
NCBI-ProteinID: AJE67307
Position
1483085..1485727
AA seq 880 aa
MLIDGHSMAFRAFFALPAENFSTSGGQATNAVYGFLSMLSTLLKDEQPTHVAVAFDVGRK
TFRTDMFPAYKAQREATPPEFKGQVEILKEVLSTLGITTIEKIDFEADDVIATLSVAAKP
LGFKTLIVTGDRDSFQLVNDTTTVLYPMKGVSVLHRFTPEAVEEKYGLTPRQYPEFAALR
GDPSDNLPNIPGVGEKTATKWIAQYETLDNLLDHADEIKGKVGASLRERIEQVRMNRKLT
EMVKDLELPLGPDDFDMKPVQVAEVAAKFDDLEFGTSLRERVLAVVKAEGSAAPVEEVEA
EQVVVDTQSLAQWLPARAGQALALALTGVAKPAGGDAYALAIADTKRHAVLVDLADISAE
DEKALATWLASEDPKMLHGAKAAYHMLAGRGFELNGVVHDTAIAAYLLRPGQRTYELADV
YQRHLQRQLSTNDNGGQLTLLDAADDQSLVDDVIAILELSEELTKQLQEIQAFELYHDLE
IPLSGILARMEAIGIAVDVATLEEQLKTFIGQVAQEEEAARELAEDPTLNLSSPKQLQVV
LFETFGMPKTKKTKTGYSTAAAEIEALAIKNPHPFLDHLLAHRQYQKMKTTLEGLIREVA
PDGRIHTTFNQTVASTGRLSSTDPNLQNIPVRTEAGRKIRSGFVVGEGYETLLTADYSQI
EMRVMAHLSQDPGLIEAYREGEDLHNYVGSKVFNVPIDGVTPELRRQVKAMSYGLVYGLS
AFGLSQQLSIPAGEAKQIMESYFERFGGVQRYLREIVEEARKAGYTETLFGRRRYLPELT
SDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRSLKEAAVKSRVLLQVHDELVVEVA
AGELEQVREILEREMDNAIKLSVPLEVSAGDGVNWDAAAH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgcttatcgacggccactcgatggctttccgcgcattctttgctttgccggctgagaat
ttctccacgtcgggcgggcaggccaccaatgctgtctatggctttctctcgatgctgtcc
acgttgttgaaggatgagcagcctactcatgtggcggtggctttcgatgtggggcgtaag
acgttccgtaccgatatgttcccggcgtataaggcgcagcgtgaagcaacgccgcctgag
tttaagggccaggtggaaatcctcaaggaggtgttgtccactttgggaattacgactatt
gagaaaatcgattttgaggctgatgatgtgatcgccacgttgtctgtggcggcgaaacct
ttaggctttaagacgctgattgttacgggtgaccgtgattccttccagttggtcaatgac
accaccacggtgttgtatccgatgaagggcgtgtctgtgctacaccgtttcacgccggaa
gcggtggaggagaagtatggactgacaccgaggcagtatccggagtttgcagcgctgcgt
ggtgatccttccgataacttgcctaatattcctggcgtgggcgagaagactgctaccaag
tggattgcccagtatgaaactttggataatttgctcgatcacgctgatgagatcaagggc
aaggttggtgctagcctgcgtgagcgcattgagcaggtccggatgaaccgcaagctcacg
gagatggtgaaggatctggagctgccgcttggtccggacgattttgatatgaagcctgtg
caggttgcggaggttgcggcgaagtttgacgatctggagttcggcaccagtttgcgtgag
cgggtgctggcggtggtgaaggccgagggttccgctgcccccgtggaggaagtggaagcg
gaacaggttgtcgtcgatacgcaatctttggcgcaatggctgcctgctagggctggccag
gcgcttgctttagcgctgactggagtggctaaacctgctggtggcgacgcgtatgcgctg
gcgattgcggataccaagcgccatgcagtgttggttgatttggcggatatttcggcggag
gacgagaaggcgctggcgacatggttggcgtcggaggatccaaagatgctgcacggcgcc
aaggctgcctatcacatgctcgctgggcgcggttttgagctgaacggcgtggtgcatgac
acggcgattgcggcttacttgctgcgtccggggcaacggacctatgagcttgccgacgtc
taccagcggcatcttcaacgccagttgtccacaaacgacaatggcggccagctcacgctg
ctcgacgcagctgatgaccaatcgcttgttgatgatgtcattgcaatccttgagctgtct
gaagaactgaccaaacagcttcaggagattcaagcttttgagctttaccatgacctggaa
attccgctatcgggaattctggcgcgcatggaggccatcggtatcgctgttgatgttgcc
actttggaagagcagttgaagactttcattggtcaggttgctcaggaagaggaagcagct
cgtgagctcgctgaggatccaaccctgaatctctcgagcccgaagcagctgcaagtggtg
ctttttgagacgttcggaatgccgaaaaccaagaaaaccaagaccggctactctacggct
gccgcggaaattgaagccctagcgatcaagaatccgcacccattcctagatcacctgttg
gcacaccgtcagtaccaaaagatgaagaccactctggagggcctcatccgtgaggtggcc
cctgatggccgtattcacaccaccttcaaccaaacggtggcgtctactggacgtttgtcg
tccactgatcccaacctgcagaacattcctgtgcgcaccgaggctggccgaaagattcgt
tcgggattcgtcgtgggcgaggggtatgaaaccctgctgactgccgactactcgcagatt
gaaatgcgcgtgatggcccacctttcccaggacccaggcttgattgaggcgtaccgcgaa
ggcgaagacctgcacaattacgtgggctccaaggtgttcaatgtgcccatcgatggcgtg
acccctgagctgcgtcgccaggttaaggccatgtcttacggcctggtctacggcttgtcg
gcatttggtttgtcccagcagttgagcattcctgccggcgaagcgaagcagattatggag
tcctacttcgagcgctttggcggagtgcagcgctacctccgggagatcgtggaggaggct
cgaaaagctggctacacggaaacgctgtttgggcgtcgtcgctacctgccggaactgacc
tcggataaccgtgtcgctcgtgaaaacgctgagcgtgccgcactgaacgctccgattcag
ggaactgccgccgacatcatcaaggtagccatgatcagggtggaccgttcactcaaggaa
gctgccgtgaaatctcgcgtgctgcttcaggttcacgatgaattggtcgtggaagtagcg
gccggcgagttggaacaagtccgtgagattctggaacgcgaaatggacaacgccatcaag
ctgtccgttcctttggaagtttcagctggtgatggcgttaactgggatgctgcagcgcac
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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