KEGG   Candidatus Cardinium hertigii: DK880_00405
Entry
DK880_00405       CDS       T05479                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cher  Candidatus Cardinium hertigii
Pathway
cher03030  DNA replication
cher03410  Base excision repair
cher03420  Nucleotide excision repair
cher03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cher00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DK880_00405 (polA)
   03410 Base excision repair
    DK880_00405 (polA)
   03420 Nucleotide excision repair
    DK880_00405 (polA)
   03440 Homologous recombination
    DK880_00405 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cher03032]
    DK880_00405 (polA)
   03400 DNA repair and recombination proteins [BR:cher03400]
    DK880_00405 (polA)
Enzymes [BR:cher01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DK880_00405 (polA)
DNA replication proteins [BR:cher03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DK880_00405 (polA)
DNA repair and recombination proteins [BR:cher03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DK880_00405 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DK880_00405 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_2 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: AWN81733
UniProt: A0A2Z3L7X4
Position
524504..527188
AA seq 894 aa
MNLFSTPKLFLLDGLSLIYRAYFALAKAAMVTAAGIPTGAIVGFVNTLLEMIQKEKPTHI
IVTFDSKEKTFRHRWFPAYKAHRQAQPEAISIAIPYIQQLLTAWGILWMEYNGYEADDLM
GSLAKQAAALDCSTYLMSMDKDLAQLVGKNVSLYKPTQHGQKAVILGEKEVLAQWGISKP
TQVCDILALEGDPTDAIPGIPSIGRITAQKLIARFETLENLLENTNQLTDKLKTTLEQYA
DQGKLSKQLATICTDIPVTLDLNSCTYQLPSQTALEPLLTQLELKQFSKRLLGTAWQAGG
NASLEAGNNAPPHHYQTIETLSDCQTLVQTLQQANVWAFDIATHASSDPYTAPLLGIAFS
YKPGEAYYVPLPTDANDRKPFIQLLQPLLGQTQLLKISHDIKYKLIVLHQHGLALATPFF
DTLIAHALLAADGKKQLADLLTRYLHYTPNQPSKASSPAVSAATSGTNAAYLLQLHEKLA
LALAAEADLFYQVEMPLIPILAAMELAGVAIDVPFLHSLSTQLQDKLKKLQAEIYALAGC
SFNIDSPKQLGNVLFEQLALPTNPLKTKKGHYATGEKILEKLTAPIASAIRSYRSLQKLR
STYVEVLPTLLHPLDQRLHTSYQQATVVTGRLSATNPNLQNIPIKTKQGRELRRAFIPHN
KGDLLFSADYSQIELRIMAACSQDATMLQAFQQDQDIHQITASKLFKVATTAVDNSMRRK
AKTANFGILYGISAFGLAQRMDAISPKEAAQWMETYFAEFPGIKSYIDQTIASAEEKGYV
TTLLGRKRFFPDIHSRNAILRNTAKRSVINTVIQGSAAEMIKLAMINIYHWLQSHALRTQ
MIMQVHDELVFNVPLEEVPSLQQQIPSLMAEALPLAHVPIKVNCHLGPNWLETS
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgaatctattttccacaccaaaactttttttactagatgggttatcgcttatttatagg
gcctattttgcccttgctaaggctgctatggtaacagcagcaggcatcccaacaggcgcc
atagttggttttgttaatacattgctagagatgattcaaaaggaaaaaccaacccatata
atagtaacttttgattccaaagaaaaaacttttcgacaccgctggtttcctgcttacaaa
gcccatcgccaggctcaaccagaagctatatccatagccattccttacattcaacagctc
ttaactgcatggggtatcctatggatggaatacaatggttatgaggcggatgatctaatg
ggtagcctagcgaaacaagcagctgccttggattgttctacctatttgatgtctatggat
aaagacctagcccagctcgtagggaaaaatgtctccctgtacaaacctacacaacatggt
caaaaagcggtaatattaggggagaaagaagttttagcccaatggggtatcagcaagcct
acccaagtatgtgacatcttagcactggaaggggatcctacagatgctatcccgggaatc
ccttctattggaagaataacggctcaaaaactcatagcaagattcgaaacgttagaaaat
ttattagaaaatacaaaccaactcacagataaattaaaaaccaccctggaacaatatgcc
gatcaaggtaaactatccaagcaattggctaccatttgtacagatataccagttacttta
gatctcaacagctgtacgtaccaactacccagccaaactgcattagagccacttttaacg
caactggaattgaaacaattcagcaaaaggttattggggactgcttggcaagcgggaggc
aatgcttctttagaagcgggaaataatgcgcctcctcaccactaccaaacgatcgaaacc
ctatccgactgtcaaaccctagtacaaacgctgcagcaagccaacgtatgggcatttgac
atagctacccacgcatcctcagatccctatacagctcccctattaggcattgccttttcc
tataaaccgggtgaagcttactatgtgccgctccctacggatgcaaacgatcgaaaacct
tttatacaactgcttcaaccactactaggccaaacgcaactgcttaaaataagccatgac
attaaatataaactgatcgttttgcatcagcatgggcttgctttggcaactcctttcttt
gatactcttattgcccatgctttgctggcagcagatgggaaaaagcagctagctgaccta
ctaacaagatatttacattatacgcctaatcagccttccaaagcatcttctcctgcggtg
tctgctgctactagtggcacaaacgccgcctacctcttacagctgcatgaaaagcttgcc
cttgccctagcagcagaagctgacctattctatcaggtggaaatgccgttgatacccata
ttggcagctatggagctagcaggcgttgccattgatgtccccttcttacatagcttaagc
acacaattgcaagataagttgaaaaagttacaagcagagatctatgccttagcaggctgc
tcttttaatattgattctcctaagcagctgggtaacgtattatttgagcaattagccctt
cctaccaatccacttaaaaccaagaaaggccactacgccacaggagaaaaaatattagaa
aaacttaccgcacccattgcatcagctattcggtcctaccgctccctacaaaaactccgc
tctacctacgtagaagtattgcctactctcttgcatcccctagatcaacggctgcatacc
tcctaccaacaagctactgttgttacagggagactaagcgctactaaccctaacctgcaa
aatatacctattaaaactaaacagggaagggaattaaggagggcttttatacctcataat
aaaggagatttattattttctgctgactactcccaaatagaattgcgcattatggctgct
tgttcccaagatgcaacgatgctacaagcttttcaacaggatcaagacatccatcaaatt
acagctagtaagctctttaaagtagctaccacagcagtggataacagcatgcgcagaaaa
gctaaaacggctaactttggcatcctctatggtatttctgcttttggtctggcccaacgc
atggatgctatatcccctaaagaagctgcccaatggatggaaacttactttgctgagttt
ccaggtattaaatcctatatagaccaaacgattgcctccgcagaagaaaaaggctacgta
actaccttattgggaaggaaacgtttttttccggatattcactcccgcaatgctattttg
cgcaacactgccaagcgcagtgtcatcaatacagtgattcagggtagtgctgcagaaatg
attaaattggctatgattaacatctaccattggctacaaagccatgctctccgcacacaa
atgattatgcaggtacatgatgagttggtttttaatgtgcccctagaggaagtgccttcc
ttacagcagcagataccttcccttatggcggaggcattgccattggcccatgtgcctatt
aaggtaaattgccacctgggtcctaattggttggagacaagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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