KEGG   Chryseobacterium glaciei: A0O34_03270
Entry
A0O34_03270       CDS       T04575                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
chh  Chryseobacterium glaciei
Pathway
chh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A0O34_03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chh03019]
    A0O34_03270
   03009 Ribosome biogenesis [BR:chh03009]
    A0O34_03270
Messenger RNA biogenesis [BR:chh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A0O34_03270
Ribosome biogenesis [BR:chh03009]
 Prokaryotic type
  rRNA helicases
   A0O34_03270
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DUF5761 AAA_19
Other DBs
NCBI-ProteinID: ANF49626
UniProt: A0A172XRS1
Position
complement(737289..739013)
AA seq 574 aa
MNLFTESNLSPDILKAVGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQFLVLCPTRELCLQISKDIKNYSKYMKDIKTTAVYGGSSIMDQIRSLK
DKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILRETPETKQT
FLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNIKHEYYVVGYRNKKEALKRLIDAN
PNQYSILFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISISLIKPEESRKLKQIKST
TKIDIVEKFIPTGAEVIKAQVGGVFEKLLTVHEDIFEFDDSLIPDLSAFTKEELVHKLLQ
FQLKDLALYYKDKHDLVDQKFSNRDDDYPRRDRDRGRDRDRDRGGRDRDTRSSGDRDRGG
RERSGKPRRKNEDMVRFFFNLGKKDQLKKLDVLDIINKATTPAEGSKKRAEIGDIEILEK
FSFFEIEKSFKGELLNNIASMKFKGKDMRAEEAN
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgaatttatttacggagtccaatttaagtcctgacattcttaaggcagttggcgaactg
ggttatgaaagcccaacagaaatccaaaaacagactatcccttttattctttcagatatt
cgcgacttgatcgcacttgcgcaaacagggacaggcaaaacagcagcgttttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaatttttggtgctttgtccgaca
cgagaactatgtcttcagatttctaaagacataaaaaattactccaaatacatgaaagac
atcaaaactacagcagtttacggtggaagcagtattatggaccaaattagatctctaaag
gataagccacagattattgtaggtactccaggaagagttatcgaccttatcaacagaaaa
gcactagacttttctgctattcattggttagttttagacgaagctgatgaaatgctttca
atgggtttcaaagacgaattggaaacaattttgagagaaactcctgaaacaaaacaaact
ttcttattctctgcaacgatgaataaagaagtggaaagaatttctaaaaattatcttaca
aaaccacaccgtatttctgtgggttctattaacgaggttaagaagaacatcaaacatgaa
tattacgttgttgggtaccgtaacaaaaaagaagctcttaagagattaattgatgcaaac
cctaaccagtattcaattttgttctgtagaacaagaatggagactcaggaagttgcagat
ttcttaatgcagaacggttacgcagctgatgctcttcacggagatctttctcaagcgcag
agagatactgtaatgaagaaattcagattgaaaaacatcgatattttggttgcaacagat
gttgcggcgagaggattggatgtggattcactaactcacgttatccattattctttacct
gatgatcctgaagtattcgttcacagaagtggaagaacaggtagagcaggaaaagacggg
atttcaatctctttaatcaagcctgaagaaagcagaaaattaaagcagataaaatctaca
acgaaaattgatatcgttgaaaaatttataccaacaggagcagaggttatcaaagctcag
gttggaggagttttcgaaaagttattgacagtgcatgaagatatatttgaatttgatgat
agcttgatcccggatctaagcgcgttcacaaaggaagaattggtacacaaattattgcag
ttccaattgaaagatcttgcattgtactacaaagataaacatgatcttgttgaccagaaa
ttcagcaacagagatgatgactatcctagaagagacagagatagaggtcgtgatagagac
agagatagaggaggaagagatcgcgatactagaagcagcggagatagagacagaggagga
agagaacgcagtggaaaacctaggagaaagaatgaagatatggtaagattcttcttcaac
ttgggcaagaaagatcaattgaaaaaattagatgttttagatattatcaacaaagcgact
actcctgcagaaggtagtaagaaaagagccgaaattggtgacattgaaattttagagaaa
ttctctttctttgaaatagaaaaatcatttaaaggagagcttttgaataatattgcatca
atgaaattcaaaggaaaagatatgagagctgaagaggcgaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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