KEGG   Chitinibacter bivalviorum: HQ393_00165
Entry
HQ393_00165       CDS       T06696                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
chiz  Chitinibacter bivalviorum
Pathway
chiz02020  Two-component system
chiz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:chiz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HQ393_00165
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HQ393_00165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chiz03021]
    HQ393_00165
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:chiz02035]
    HQ393_00165
Transcription machinery [BR:chiz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HQ393_00165
Bacterial motility proteins [BR:chiz02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HQ393_00165
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0154 UPF0122
Other DBs
NCBI-ProteinID: QLG86780
UniProt: A0A7H9BDK4
Position
complement(33534..34274)
AA seq 246 aa
MSSNRALSLYRSTQSSSEEDRVQQHAPLVRKIAYHMISKLPASVDVDDLIQVGLMGLMEA
ARNFDIDAGVQFETFASQRIRGAMLDELRSADWLPRQARKNMREIERAIVALEQQQGRQP
TEGEVAQALNIPLDEYQTMLGDARGHQLLHYEDFEVEGENDQLDQYAADHSANPADVLSD
ESFRGHLIEAISGLPEREKLLMALYYDEELNLKEIGAVLGVSESRVCQLHSQAVARLRGK
LKDWLI
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcatccaatcgcgccctttcactttatcgcagcacccaaagctctagcgaagaagat
cgcgtgcaacaacatgcgcccttggtcagaaaaattgcttatcacatgatcagcaagctg
cccgccagcgttgatgtcgacgacttaatccaagtaggcttaatgggcttgatggaagct
gcccgcaattttgatattgatgctggcgtgcagtttgaaaccttcgccagccaacgcatc
cgtggcgccatgttggacgagctgcgcagtgcagactggctgcctcgtcaggcgcgaaaa
aacatgcgcgaaatcgagcgtgcgatcgtggcgctggagcaacaacaaggccgtcagccc
accgagggcgaagtggctcaggcgctcaatattccgctcgacgaataccaaaccatgctc
ggtgatgctcgcggccaccagttattgcactatgaagatttcgaagttgagggcgaaaac
gatcagctcgatcaatatgccgccgaccacagcgccaatccggccgatgtcttaagcgat
gaatcgttccgcgggcacctgattgaagcaattagtggcttgccagaacgcgaaaaacta
ctgatggcgctgtattacgacgaagaactcaatctcaaagaaatcggcgccgtcctaggc
gtatccgaatcgcgtgtttgccaactccatagccaagcagtcgcccgactgcgcggtaaa
ctcaaagactggctgatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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