KEGG   Chryseolinea soli: D4L85_26195
Entry
D4L85_26195       CDS       T05641                                 
Name
(GenBank) HD domain-containing protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
chk  Chryseolinea soli
Pathway
chk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D4L85_26195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chk03019]
    D4L85_26195
Enzymes [BR:chk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     D4L85_26195
Messenger RNA biogenesis [BR:chk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     D4L85_26195
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AYB33854
UniProt: A0A385SSK8
Position
complement(6268274..6269707)
AA seq 477 aa
MNLATSLDHPVFRRIGAVADRLGLDTYVVGGYVRDLILKRPSKDIDFVCIGSGIALAQEV
AKALGPDVHVAIYKNFGTAQIRFDNMDLEFVGARKESYRAESRKPIVEDGTLDDDQKRRD
FTMNALAISLNQRNFGELIDPFGGQEDMRKKSIRTPLDPEVTFSDDPLRMMRAVRFASQL
NYDIEADTFQALTTQAARLKIVSQERITDELNKIILSPIPSYGFKLLFHSGLLNQFFPEL
VALHGVEYVGNRAHKDNFFHTLQVLDNVAKESSDLWLRWAAILHDIAKPATKRYDKDHGW
TFHGHEDRGARMTPGIFKRLKLPMNEHMLFVQNLVRLHLRPIPLAKEVTDSAIRRLLFDA
GNDIDALMTLCRADITSKNMEKVGRFLKNFDLVEQKIAEVEQKDNIRNFQPPVTGDMIMA
MYNLPPGRIIGDIKEQIKEAILEGEIRNDKEEALALLHRIAAEKGLVRNADPLPNPE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaacctggccacctccctcgatcaccccgtattccgccgcatcggcgctgtagccgac
cggttgggtctggatacctacgtggtgggaggctatgtccgtgacctcattctgaagcgt
ccaagtaaagacatcgatttcgtctgcatcggcagtggtatcgccctggcccaggaagtg
gccaaagccctcggcccggatgtgcatgtggccatctataaaaactttggcaccgcccag
atccggttcgacaacatggacctggagtttgtgggggcccgcaaagaatcctaccgtgcc
gaatcccgcaaacctatcgtggaagacggcaccctcgacgacgaccagaagcgccgcgac
ttcaccatgaacgccctggccatcagcctaaaccagcggaattttggcgagctcatcgac
ccgtttgggggccaggaagacatgcgcaaaaaaagcatccgcaccccgctcgacccggag
gtcaccttctccgacgacccgctccgcatgatgcgcgccgtccgctttgcttcccaactg
aattacgacatcgaggccgacacctttcaggccctcaccacccaagcggcccgtctcaag
atcgtatcacaggagcgcattacggacgaacttaacaagatcattctgagccccatacca
tcatacggcttcaagctgctctttcacagtggcctgctcaaccagttcttccccgagctg
gtggcgttgcacggtgtagagtacgtggggaaccgcgcccataaggataatttcttccac
accctgcaggtgctggacaacgtcgccaaggaatccagtgacctctggttgcgctgggcg
gccatactacacgacatcgccaagccggccaccaagcgctatgacaaagaccacggttgg
acttttcacggccatgaagaccgtggcgcgcgcatgaccccgggcattttcaagcgcctc
aaactgcccatgaacgagcacatgctgtttgtccagaacctcgtgcgtctgcacctgcgc
ccgattccattggccaaggaggtgaccgacagcgctatccgccgcttgctcttcgacgcg
ggcaacgacatcgacgcgctcatgaccctgtgccgggccgacatcacttccaagaacatg
gaaaaggtgggccggttcctgaagaattttgacctcgtggagcagaagatcgccgaggtg
gagcagaaggacaacatccgcaatttccagccgcccgtgaccggcgacatgatcatggcc
atgtataacctgcctcccggccgcatcatcggcgacatcaaggagcagatcaaggaagcc
attctggaaggcgagatccgaaacgacaaggaggaggccctggccctgctccaccggatc
gccgccgaaaaggggctggtgagaaacgccgatcccctgccaaatccggaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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