KEGG   Chloroflexus aurantiacus Y-400-fl: Chy400_0890
Entry
Chy400_0890       CDS       T00859                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
chl  Chloroflexus aurantiacus Y-400-fl
Pathway
chl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Chy400_0890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chl03400]
    Chy400_0890
Enzymes [BR:chl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Chy400_0890
DNA repair and recombination proteins [BR:chl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Chy400_0890
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 AAA_11 HHH_5 Viral_helicase1 AAA_22 UvrD-helicase Helicase_RecD nSTAND3 PIF1 T2SSE AAA_16 TrwB_AAD_bind MeaB AAA_28 DUF4314 DEAD AAA_29 HHH_2 SRP54 AAA SLFN-g3_helicase NTPase_1 NACHT DUF1918 FtsK_SpoIIIE Mg_chelatase MobB bpMoxR
Other DBs
NCBI-ProteinID: ACM52316
Position
complement(1121638..1123815)
AA seq 725 aa
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPT
HGRQFHVQRYRSRLPATVDGIRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERL
SEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGVAVRIYRHYGDDALRVVQQEP
YRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLI
QQRSSLAARYAPSRWNLVFAHLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTS
LRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIHRLLEYGPDGTFRRNAEYPLD
CDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPR
RFGFDPRRDIQVLSPTHKGVAGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQ
RNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNGLDLDDLTLAYALSVHKSQGS
EYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
RLGRT
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgcagcagcttgacggcaccctcgaacggatcacctttcagagtgagagcgatggctac
accgtggcccaacttcgtccgcttggcaaacgtcacacggtgacaattgtcggcaacctg
ccgggcgtacagcccggtgaacaactcagtctcgaaggtgaatggcgcgatcacccgacc
catggccggcagtttcacgtccagcgctaccggagccgtctgccagccacggttgatggt
attcgccgctatctgggcagcggcttgatcaagggtgtcgggccggtcctcgccaaacgg
atcactgaaacctttggcaagtacaccttagaggtgctggatcgcgaaccggagcgtctg
agcgaagtccccggtctggggcggaagaaggccgtgctgatcgccgaggcatggcgggcg
cagcagcgtatcaaagacctgatgttactcctgcaggacctgggtctgcctaccggggtt
gccgttcgtatctaccggcattacggcgatgacgctttgcgagtggtgcaacaggaaccg
taccgtctggccgatgaagttgatggggttgggtttcgtaccgctgacgccattgccgcc
ggtctcggcattgcccgcgatgatccgcagcggatcgctgccgggctgcgttatacgctg
gcacaggcttccgacgaagggcattgttacctgcccgccggtgaactgaccagacgcgct
gccagcctgctttcagtgacgactgctgcggtgacggatgtgtttacgcagatggtggca
accaatcagctttggcgcgatccaattgtggccgatcccgaccctgatcgctacccgatc
tacctgccgccgctggcatttgccgagattggggttgccaacgccattcgccgcctgatc
cagcaacgctcgtccctggctgcacgctatgcacctagccgctggaacctggtgtttgcc
catcttgccgaacggcgtgggatcaatctcagcgatcaacagcgccgtgcggtacagacg
gcgctgaccacaccggtcatgttgctcaccggtgggccggggacgggcaaaaccaccagc
ctgcgtgcgctggtcatgcttttacaggccagaggctatcgtccgctgctggcggcaccg
accggacgggcagcccggcgcttgagcgaggcgaccggcctggaagcccgcactattcac
cgtctgcttgaatatggccctgatggaacatttcgccgcaacgccgaatatcccctcgac
tgtgacctcctggtgatcgatgaagccagtatgctcgatattgtgctggccaatcagctc
ctgaaggcgatcccagccggtgcgcatctggtcatcgtgggggatgccgatcaattgccg
agtgttggccctggccgtgtgcttggtgatgtgatcgagagtggggttgtgccgcgggtg
catctcgatgcgatctttcgccaggctgccggcagtgggattgccgccaatgcgcgacgg
atcaacgaaggccaccttcccgaatggggtgcgcacgatgatttctacttctttgcagct
gcaacacccgaacggtgtgcggcgctgaccgtagagctggtggtagaacgcatcccgcgt
cggtttggatttgatcctcgtcgtgatattcaggtgctcagtccaacccacaaaggggtg
gccggagttgcggccctcaatgcagcattgcaggcagcgttgaacccaccgcgccccggt
gtcgccgaataccacagtggcgctaccatctttcgggtaggggatcgcgtcatccagcag
cggaacgattatgatcgggatgtctacaacggtgatgttggtgagattgtcgcggttgat
cccaccgggccaacagttatggtgcgctttgaggatggtcgaaccatccgttacaacggt
ctcgatctcgatgatctcaccctggcttacgccctcagcgtccacaaaagccagggaagt
gaatacccggttgtcgtccttcccctcctgctgtcccatcagccactgctgcaacgtaac
ctgatctacaccgcagtgacccgcgctcgccagcttgtcgtgatcgttggtgatcggcga
gcggttgaggtggcgattgccgcagccaatgttgaacgccgctacaccggcctgagcatt
cggctcggtagaacctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (32)   
   Pfam (32)   
All databases (41)   

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