KEGG T00859: Chy400

Chloroflexus aurantiacus Y-400-fl: Chy400_1829

Entry

Chy400_1829       CDS       T00859

Name

(GenBank) excinuclease ABC, A subunit

K03701

excinuclease ABC subunit A

Organism

chl Chloroflexus aurantiacus Y-400-fl

Pathway

chl03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:chl00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Chy400_1829
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chl03400]
    Chy400_1829
DNA repair and recombination proteins [BR:chl03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Chy400_1829
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Chy400_1829

SSDB

Motif

Pfam:

UvrA_inter UvrA_DNA-bind ABC_tran AAA_16 nSTAND1 SMC_N AAA_29 DnaJ_CXXCXGXG RsgA_GTPase Viral_helicase1 ExoX-like_C BCA_ABC_TP_C AAA_21

Other DBs

NCBI-ProteinID:

ACM53236

Position

complement(2313635..2316532)

AA seq 965 aa
MARTTIVIKGAREHNLKGIDVEIPRDRLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMEKPQVDLIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLFARIGHQ
YCHRCGQPVAAQSAQQMVDRVLLLPPGTRFMVLAPVVSQRKGEYKDIFAEAKAEGFVRVR
VDGEIRSLDEEIKLNKKVKHSIEVVIDRLALPAASDNGDREGFITRLTDSIETALRVGEG
KVIISLADEPADPAQPREWMMSESNTCPSCGISFPELTPQMFSFNSPQGACPTCSGLGAR
LEVDPALLVPNDALSIHDGAVTYWGEMRKKQDTWAYKALQAIAAHYRIDLDAPWHTLTQR
QRDAIIYGSGQERIRFSWTNEHGSRGEYYRTWEGLASEIRRRYMQSGSDTMREYYTQYMS
EQPCPDCQGARLRPESLAVRVVGRTIRDVTRMNIAQALDWARELPHHLNETEQAIVGDVL
KEIRERLGFLHNVGLHYLTLDRAAPTLSGGEAQRIRLASQIGSGLVGVMYILDEPSIGLH
QRDNRKLLDSLLRLRDLGNTLIVVEHDLETMQAADWIIDFGPGAGVKGGQIVTAGTPDQV
AQHPTSLTGQYLSGRLTIHIPTSRRSATKGWLTLEGATLNNLRDVTVSFPLGCFIAVTGV
SGSGKSSLITETLYPALANRLNRAQLKPGPFRNLYGLEQLDKVINIDQQPIGRTPRSNPA
TYVKLFDLLRELFAETPEAKLRGYGPGRFSFNLKGGRCEACEGNGEIKIDMQFLADVWVR
CAECKGKRYNRETLQVKYKGKTIADVLDMDVQTALEFFANVPRVRRILQTLHDVGLDYIK
LGQPATTLSGGEAQRVKLAKELARVATGRTIYILDEPTTGLHFADIQNLLRVLHRLVDAG
NTVVVIEHNLDVIKTADYVIDMGPEGGDGGGEVVALGTPEEVARHPTSHTGRFLRDILDL
ATVVE

NT seq 2898 nt +upstreamnt +downstreamnt
gtggccaggacgacaatcgtaatcaagggtgcccgcgagcacaacctcaaagggattgat
gttgaaattccgcgtgaccggctggtggtattgacgggtgtcagtggatcgggaaaaagc
tcgctggcgtttgatacgctctacgccgaaggtcaacgacgctatgtcgagagcttatcg
gcctacgcacgccagtttctcggtcagatggaaaaaccgcaggtcgatctgatcgaaggc
ttgtcaccggcaatcgctatcgaacagaagagcgccagtaagaacccgcgctcaaccgtt
ggcaccgttaccgaaatttacgattacctgcgtctgctcttcgcccgcattggtcatcag
tactgtcatcgttgtggtcaacccgtcgctgcgcaatcggctcaacagatggttgatcgg
gtgctcttactcccaccgggcacccgctttatggtgctggcccccgttgtctcgcaacgc
aaaggtgagtacaaagacattttcgccgaagcgaaggcggaaggttttgtgcgggtgcgg
gtagacggtgaaatccgctcgctcgacgaagagatcaagctcaacaagaaagtcaaacac
tcgatagaggttgtcattgaccgtctggccctgccggcggcaagtgataatggtgatcgg
gaaggttttatcacccgcctgaccgacagcatcgaaaccgcattgcgggtaggcgaagga
aaagtcatcatcagcctggccgacgagcctgccgatcctgctcaaccccgcgagtggatg
atgagcgaaagcaatacctgtccgtcgtgtggtatctccttcccggaactgaccccgcag
atgttttcattcaactcgcctcaaggcgcctgcccgacctgtagtggcctgggcgcacgg
ctggaggtcgatccggcgctgctggtgcccaacgacgcgctctcgatccacgatggtgca
gtcacttattggggcgaaatgcgcaagaagcaggacacctgggcgtataaggcgttacag
gcgattgccgcccactaccggatcgatctcgacgcgccatggcatacgctgacccagcgt
caacgcgatgccatcatctacgggagtggtcaggaacgcatccggttttcgtggacgaat
gagcatggttcccgcggcgagtattatcgcacctgggaagggctggcgagcgaaatccgg
cgtcgctacatgcagagcggctcagacaccatgcgcgaatattacacgcagtatatgagc
gagcagccctgcccggattgtcagggtgcccggctccgcccggaaagtctggccgtgcgc
gtggttggccgcacgattcgcgatgtgacccggatgaatatcgcgcaagccctcgattgg
gcgcgtgagttaccccatcacctcaacgagaccgagcaggcaatcgtcggtgatgtgctg
aaagagattcgcgaacgactcggcttcctgcacaacgttggtctgcactacctgaccctc
gaccgggccgcgccaactctctccggcggggaagcgcaacggattcggctggcctcacag
atcggttccgggctggttggcgtgatgtatattctcgatgagccgagtatcggtttgcat
caacgcgataatcgcaaactcctcgactcactgttgcgcttacgtgatctgggtaacacc
ctgatcgtcgtcgaacacgacctggaaacgatgcaggccgccgactggatcattgacttt
ggccccggagccggtgtgaagggcgggcagatcgttactgccggtaccccggatcaggtt
gcccaacatccaacctcgctcaccgggcagtacctctccggtcgactgacgatacacatc
ccaaccagccgtcgttcggcgacgaagggatggttgacgctggaaggagcaacgctcaac
aacctgcgcgatgtcaccgtcagtttcccacttggctgcttcatcgccgttaccggtgtc
tccggttcgggcaaatcatccctcattaccgaaacactttacccggccctggctaatcgc
ctcaaccgtgcccagctcaaacccggccccttccgcaacctgtacggacttgagcagctc
gacaaggtcatcaacatcgaccagcagccgattgggcgcacaccgcgttcaaatccggcg
acctatgtgaagctgttcgatctcttgcgcgagctatttgccgaaacgcccgaagccaaa
ctgcgcggttacgggccaggccgctttagcttcaacctcaaaggtggacgctgtgaagcc
tgtgaggggaacggtgaaatcaagattgacatgcaattcctggccgatgtctgggtacgc
tgcgccgagtgcaagggcaaacgctacaaccgcgagacgttgcaggtgaagtacaaaggc
aagaccatcgccgacgtgctcgatatggatgtgcaaacggcgctggagtttttcgccaac
gtgccacgggtacgccggattctgcaaaccctgcacgatgttggcctcgactacatcaaa
ctcggtcaaccggcgaccaccctctctggcggtgaagcccagcgcgtcaaactggcgaag
gaactggcgcgcgtggcaaccggtcgcaccatctacattctcgatgaaccaaccaccggt
ttacactttgccgatattcaaaacctgctgcgggtgttgcaccgtctggttgatgccggc
aacacggttgtcgtgatcgagcacaacctcgacgtgatcaagacggcggattatgtcatc
gatatggggccggaagggggcgacggcggcggtgaagtggtcgctctgggcaccccggaa
gaggttgcccgccatcccacgtcgcataccggacgatttctacgcgacattcttgatctg
gcaacggtggttgaataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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