KEGG   Chloroflexus aurantiacus Y-400-fl: Chy400_3331
Entry
Chy400_3331       CDS       T00859                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
chl  Chloroflexus aurantiacus Y-400-fl
Pathway
chl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Chy400_3331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chl03019]
    Chy400_3331
   03009 Ribosome biogenesis [BR:chl03009]
    Chy400_3331
Enzymes [BR:chl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Chy400_3331
Messenger RNA biogenesis [BR:chl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Chy400_3331
Ribosome biogenesis [BR:chl03009]
 Prokaryotic type
  rRNA helicases
   Chy400_3331
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_30 CMS1 AAA_22 Flavi_DEAD
Other DBs
NCBI-ProteinID: ACM54708
Position
4152934..4154592
AA seq 552 aa
MTTFAELGLSDALVSTLSGLGYDEPTPIQAQAIPLLLAGRDVIAQAQTGTGKTAAFALPM
IERVTDALVVQALVLAPTRELAVQVAEAIHRYGRHRSLRVLPIYGGQPIERQLRGLAQGT
QVVVGTPGRVLDHLKRGSLRFDHLRMVVLDEADEMLDMGFAEELEAILQLTPTERQTALF
SATLPPAVQNLTLRYTRQPVRVSIAAEQLTTPRIRQTYYEVLARDKLDALCRVLDAEMPQ
LAIVFCRTRQEADDIGERLQGRGYAAESLHGDLSQAARDRVMRRFREGQLDVLVATDVAA
RGLDIAEVSHVINYDVPTDPESYVHRIGRTGRAGREGVAITFITPRERRMLQIIERVTRT
RIERCQMPTLADVAARRRSALVDQLRTAMADPALAGYTTLVDELAGTGDLRTVAAAALKL
LLNEDQTDQVDTITRLDPPPAERPQRERSERSARSPRTKADTRSERVERTMVRLQINLGR
NDQIRPADIVGAIANESGLPGRSIGEIEIRARTSVVEVPRRAAQQVLQALNRTTLRGQRV
RAVLLAEAAVAA
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgacgacttttgctgagttgggcctgagtgatgcgctggtgagcacattgagcgggctt
ggctacgacgaaccaacacccattcaggcccaggctattccattgttacttgccggtcgc
gacgtgatcgctcaggcccagaccggcaccgggaagacggcagcatttgcgttgccgatg
attgaacgtgtcaccgacgcgctggtggtgcaggcgcttgtcctggcccctacccgcgag
ctggccgtccaggtggcagaggcgatccatcgctatggtcgccaccgttcgttgcgcgtg
ttaccgatttatggcggccagcctatcgagcgccagttgcgcgggctggctcaggggacg
caggtcgtggtcgggactccaggtcgggtgctcgatcatctgaagcgtggcagtctgcgc
tttgatcacctgcgcatggtggtgcttgacgaagccgatgagatgctcgatatgggcttc
gccgaggagttggaggcgattttgcagttgacgccaacggaacggcagaccgctctcttc
tcggcgacgttgccgccggcagtgcaaaacctgaccctgcgttatacccgccagccggtg
cgggtgagcattgctgccgagcaattaacgaccccgcgtatccggcaaacctactacgaa
gtgctggcccgcgacaagctcgatgctctctgccgggtgctcgacgccgagatgcctcag
ttggcgattgtgttctgccgaacacgccaggaggccgatgatattggtgaacggctgcaa
ggccggggctacgctgccgagtcgctgcacggcgacttaagccaggccgcccgtgatcgg
gtgatgcggcgtttccgcgaagggcaacttgacgtgttggtggcaaccgatgttgcggcc
cgcggccttgacatcgccgaggtgagtcacgttatcaactacgatgtgcctaccgacccc
gaaagctacgtacaccggattggtcgtaccggacgggccgggcgtgaaggggtggcgatc
acctttatcaccccacgcgaacgccgcatgttgcagatcatcgagcgggtgacacgcacc
cggatcgagcgctgccagatgccgacgctggccgatgtagcggcccgccgtcgttcggcg
ctggtcgatcaattgcggacggcgatggccgatcctgcgcttgccggctacaccaccctg
gtcgacgaactggctggcacaggtgatctgcgcacggtagctgccgctgcgttgaaattg
ctcttgaacgaagatcagaccgatcaggtggatacgattacccggctcgacccaccgcct
gctgagcgtccgcagcgcgaacgctcggaacgatctgcgcgttcgccacgcaccaaagcc
gacacacgcagcgagcgtgttgagcggacgatggtgcgcttgcagatcaaccttggtcgc
aacgatcagattcgccctgctgacatcgtcggcgccattgcaaacgagtccggtttgccc
ggacgcagcatcggcgagatcgaaattcgggcacggacaagcgtcgtcgaagtaccgcgt
cgggcagcccaacaggtgctccaggcgcttaatcggacaacgttgcgcggtcagcgtgtc
cgggctgtgctcctggcagaggcggcagtggcagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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