KEGG   Corynebacterium halotolerans: A605_01590
Entry
A605_01590        CDS       T02472                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
chn  Corynebacterium halotolerans
Brite
KEGG Orthology (KO) [BR:chn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chn03021]
    A605_01590
Transcription machinery [BR:chn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A605_01590
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF134 HTH_23
Other DBs
NCBI-ProteinID: AGF71332
UniProt: M1NP89
Position
complement(345899..346468)
AA seq 189 aa
MTSPPERDDQRVTELALAAGRGDRTALTEFIRATQGDVWRLLAHLGGRDVADDLTQETYL
RVMGALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSATEYEDAAATTPSEGANAT
SWSEWIDVRTLIDALPDERREALILTQVLGYTYEEAAKIAGVRVGTIRSRVARARKDLIE
ATDGPGDGA
NT seq 570 nt   +upstreamnt  +downstreamnt
atgacctctccccctgagcgcgatgaccagcgcgtcactgagctggccctggcggccggc
cggggggatcgcaccgcgctcacggagttcatcagagcgacccagggggacgtgtggcga
ctgctcgcccacctcggcggccgcgatgtcgcggacgatctgacccaggagacctatctg
cgggtgatgggcgcgctcccccgcttcgccgcgcgttcgtcggcacgcacctggctactc
tcgctcgcccggcgggtgtgggtggacaatatccgccacgacatggctcggccccgcaaa
tccgccaccgagtacgaggacgctgccgccaccaccccctcagagggggccaacgcgacg
tcgtggagcgaatggattgacgtccgcacgcttatcgacgccctgcccgatgagcgccgc
gaggcgctcatcctcacccaggtgctcggctacacctacgaggaggccgcgaagatcgcc
ggagtgcgcgtgggcaccatccgctcccgcgtggcacgcgcccgcaaggatctcatcgag
gccacggacgggccgggcgacggcgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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