KEGG   Chlamydia psittaci RD1: Cpsi_2521
Entry
Cpsi_2521         CDS       T02153                                 
Name
(GenBank) putative ribonuclease
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
chr  Chlamydia psittaci RD1
Pathway
chr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Cpsi_2521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chr03019]
    Cpsi_2521
   03016 Transfer RNA biogenesis [BR:chr03016]
    Cpsi_2521
Enzymes [BR:chr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Cpsi_2521
Messenger RNA biogenesis [BR:chr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Cpsi_2521
Transfer RNA biogenesis [BR:chr03016]
 Prokaryotic type
  tRNA degradation factors
   Cpsi_2521
SSDB
Motif
Pfam: RNB OB_RNB CSD2
Other DBs
NCBI-ProteinID: CBY16778
Position
complement(253782..255830)
AA seq 682 aa
MVKRIRKKRPQSFRRNSKQILISGVLFVHGKKGFGFVTPDHPEEYPFDIFIPARDLKGAL
DGDHVVVSLFPNSKEGEKRKGVIHQVISRGKTVLVGTITSLIDASTAFVCVNALGPEIPV
KAKLIPKRDYKIGDRLLLSTPVWKAKPESKEPPPLEMLEFIGNISNAKSDFPCIKAEYGI
QEEFPEAVIEETNHFSQKHISQALRSRKDLRNLLCFTIDSITAKDFDDAVSLTYDNNDNY
ILGVHIADVSHYVTPHSALDQEASKRCNSIYFPGKVIPMLPPALSDNLCSLKPNVDRLAV
SVFMTFTKSGHLSDYEIFRSVIRSKYRMTYDEVDEIVENKQPHPIAKTLLAMAELSEKFS
DIREKRGCIRLVLPSFTMSLDNLQEPVTLIETRQTLSHKLIEEFMLKANEVVAYHISHQG
VSLPFRIHESPNDESLLSFQEIAKAMGFDIIMTPAQEPDFQYLLQESSAGHPLEPILHSQ
FVRSMKTASYSTENKGHYGLKLDFYTHFTSPIRRYIDLIVHRLLFNPMSIEETRLEHIVR
ACSTQERIAAKSEFAFETLKKNRFLHKFLKEQPDSIYQAYIITINPEGLSFTVPEFCQEG
FIPSAQLPKEFSLKKKTSPDDLPPKMRPGAPIKVKLSEVNLLNQVITWSLATKTSNTIKK
SPASTKKTKEKKPRTRRKRNTE
NT seq 2049 nt   +upstreamnt  +downstreamnt
ttggtgaaaagaatcagaaaaaaacgaccacaaagctttagaagaaactcgaaacaaata
ttaatttccggcgtcctatttgttcatggaaaaaaaggtttcggttttgttacacccgac
cacccagaagaatatccttttgatatttttattcccgcaagagatcttaaaggagcctta
gatggagatcacgttgtcgtctctcttttccccaattctaaagaaggagaaaaaagaaaa
ggagtcattcaccaagtcatctctagaggcaaaactgttcttgtaggaacaataacctca
ctcattgacgcctcaacagcgttcgtctgtgtgaatgctttgggcccagaaatccctgta
aaagcaaaacttattcctaaacgtgattataaaatcggcgatcgtttactactcagtact
cctgtatggaaggcaaaacctgaatccaaagaaccccctccgttggaaatgctcgaattt
attgggaatatctccaacgctaagtccgattttccctgcataaaagctgaatatgggatt
caagaagaattcccagaagctgttatcgaagaaacgaaccatttctcacaaaaacacatt
agccaagcactaagatcacgaaaagatcttcgcaatctcctatgctttactattgactca
ataactgcaaaagacttcgatgatgccgtatccttaacctatgacaataacgataattac
atccttggcgtccatattgcggatgtctcccactacgtaacacctcactccgctctagat
caagaagcaagcaaaagatgtaattctatctactttcctgggaaagtgattcctatgctc
ccccccgctctttcggataatctctgcagtttaaaacctaacgtcgatagactcgccgtt
tctgtgttcatgacgtttacaaaatccggtcatttatccgattacgaaatattccgtagt
gtaatccgtagtaaatatcgcatgacctatgatgaagtggacgagatcgtagaaaataaa
caaccccaccctatagcaaaaactcttctcgctatggctgaactcagcgaaaaattctct
gatattagagaaaaacgtgggtgcatacgtcttgttcttccttcattcaccatgtctcta
gataacctacaagaacctgtaactcttatagaaacacgacaaacgctatcacataaactc
atcgaagagtttatgctcaaagctaatgaagtcgttgcttatcatatttcccaccaaggc
gtttctctgccatttagaatccatgaatctcctaatgatgagagtttgctctctttccaa
gagatcgccaaagctatgggatttgatattatcatgaccccagctcaagaacctgatttt
caatacctattacaagagagctctgcaggacatcctctagagcccattctacattcacaa
tttgttcgtagtatgaaaaccgcctcatactcaaccgaaaataaaggtcattatggtctt
aaattggatttctatacccacttcaccagccccatccgtcgctatatcgatcttattgtt
catagactcctcttcaaccccatgtctatagaagaaacccgtctagaacatattgtaaga
gcatgctctactcaagagcgtatagccgcaaaatctgaatttgcttttgaaacccttaaa
aaaaatcgttttttacataagttcttaaaagaacaacccgactccatttatcaagcttac
atcatcacaatcaatcctgaaggtctctcatttaccgttccggaattttgccaagaagga
tttattccatccgcacaattacccaaagaattctctttgaaaaagaaaacatcccccgat
gatctacctcctaaaatgcgtccaggagcccctataaaagtcaaactctctgaggtaaat
ctcctcaatcaagtgattacttggtcattggcaaccaaaacatcaaacacaataaaaaaa
tccccagcgagcacgaaaaaaactaaggagaagaaacctagaactagaagaaaaaggaat
acagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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