KEGG T02153: Cpsi

Chlamydia psittaci RD1: Cpsi_4981

Entry

Cpsi_4981         CDS       T02153

Symbol

gyrbB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

chr Chlamydia psittaci RD1

Brite

KEGG Orthology (KO) [BR:chr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chr03032]
    Cpsi_4981 (gyrbB)
   03400 DNA repair and recombination proteins [BR:chr03400]
    Cpsi_4981 (gyrbB)
Enzymes [BR:chr01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Cpsi_4981 (gyrbB)
DNA replication proteins [BR:chr03032]
Prokaryotic type
  DNA Topoisomerases
   Cpsi_4981 (gyrbB)
DNA repair and recombination proteins [BR:chr03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Cpsi_4981 (gyrbB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 UPF0257 Toprim_4

Other DBs

NCBI-ProteinID:

CBY17027

Position

569465..571885

AA seq 806 aa
MDAKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSIDEAMAGYCSE
IHVRILEDGGITISDNGRGIPIQTHEKESKKQGRDVSALEVVLTVLHAGGKFDKDSYKVS
GGLHGVGVSCVNALAEKLVATVYKDKQAYQMEFSRGVPVTGLQLLGATDKQGTEITFYPD
NEIFSSCVFDRSILIKRLRELAFLNRGITIIFEDDRDVSFDKVIFFYEGGIQSFVSYLNQ
NKESLFPEPIYISGSRTGDDGDIEFEAALQWNSGYSELIYSYANNIPTRQGGTHLTGFST
ALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTKQKLGNSDVGS
VSQQITGEALTIFFDENPQIAKMIVEKVFIAAQAREAAKKARELTLRKSALDSARLPGKL
IDCLEKDPAKCEMYIVEGDSAGGSAKQGRDRRFQAILPIRGKILNVEKARLQKIFQNQEI
GTIIAALGCGIGSDNFNLGKLRYRRIIIMTDADVDGSHIRTLLLTFFYRHMTALIENECV
YIAQPPLYKVSKKKDFRYILSEKEMDDYLLTLGVCDSKLVFKNGDREISGEALDSFVKLI
LNIENFIVALEKKAVPFSEFLEMRKETLGYPLYYSPPQSGKQGGRYFYSSEEKEEEMASR
EDADSMKVIELYKTSIFAEIQEELRDYGLDIRHYLNPKDSEMVITNEDSKTLPYTCYTLK
EVIDHLKALGRKGIEIQRYKGLGEMNADQLWDTTMNPEQRTLVRVSLKDAVEADHIFTML
MGEEVPPRREFIENHALSVKMNNLDI

NT seq 2421 nt +upstreamnt +downstreamnt
atggacgcaaaagaaaaaaattatgacgcctcagctatcactgttttagaagggcttcaa
gccgttcgtgagcgtcctggaatgtatataggagatactgggatcacagggcttcatcac
ttagtgtatgaggttgtagacaacagtatcgacgaagccatggcgggttattgttctgaa
atccatgtaaggattttagaagatggtggaattactatctctgacaatggtcgaggtatt
ccaattcagacccatgaaaaggaatcgaaaaaacaaggtagagatgtttccgcattagag
gttgttctcacggtcctgcatgctggaggaaaatttgataaggatagctataaagtatcc
ggaggtttgcacggtgtcggagtttcttgcgttaacgccctggctgaaaaattagtagcc
acagtatacaaagataagcaagcttatcagatggagttttccagaggagttcctgtaact
ggtttgcagttgttaggagctaccgataagcagggaacagaaatcactttctacccagat
aatgagatcttttcttcatgtgtttttgatcgctctatcttaattaaaaggttgcgagag
cttgcatttttgaatcgtggtataacgatcatttttgaagatgatcgtgacgtcagtttt
gataaagtcatctttttctatgaaggaggtattcaatccttcgttagttatttaaaccaa
aataaagaaagtcttttcccagaaccaatttatatttcaggaagtcgaactggagatgat
ggtgacattgaatttgaagcagctctccaatggaattctggatattctgaattaatttat
tcatatgcaaataatattcctacacgtcaaggaggaacccaccttacaggattttctaca
gcactaactcgtgtacttaatgcctatattaaagctcataatttagctaagaacgataag
ctctcgttgacgggagaagatattcgtgaaggactcactgctgtagtttctgttaaagtt
cctaatcctcagtttgaagggcaaactaagcagaaactaggaaatagtgatgtaggttcc
gtatcacaacagatcactggagaagcgctaacaatcttctttgatgagaacccacaaatt
gcgaagatgatcgttgaaaaggttttcattgcagctcaggctagagaggcagcaaagaag
gctagggagctgacgttaaggaaaagtgctttggatagcgcacgactacctggaaagctt
attgactgtttggaaaaagatcctgcaaaatgtgaaatgtacattgtggagggggattcc
gctggaggatctgctaagcaaggtagagaccgtcgttttcaggctattttacctatccga
ggtaagatcttaaacgttgagaaagcacgtttacaaaagatcttccaaaaccaagaaata
ggaaccatcattgcagctttaggttgcggtattggatcggataattttaatttaggtaag
ctacgctatcgacgtatcattatcatgacagacgcggatgttgatggctctcatattcgt
actctgctattaacgttcttctaccgccatatgacagcattaattgaaaatgaatgtgtc
tatatagctcagcctcctttatacaaagtaagcaagaaaaaagatttccgttacattctt
tcagaaaaggagatggatgattatctattaactttaggagtttgtgacagtaaactggtg
tttaaaaacggagatcgtgagatcagtggagaagctttggacagctttgtcaagcttatc
ttgaacatagaaaactttatcgttgctttagagaaaaaagctgttcctttttctgaattt
ttagaaatgcgcaaggaaaccttaggctatcctttatattatagccctccgcaaagcggg
aagcaaggtggacgctatttctattcttccgaggaaaaagaagaagagatggcatctaga
gaagatgcggattctatgaaggttattgaattatataaaacgtcgatctttgcagaaatt
caagaggaattgcgagactatggtttagatattcgccattatctcaatcccaaagattct
gaaatggtgataaccaatgaagattcaaaaacgttaccttatacttgttatactttaaaa
gaagttatcgatcatctcaaagcccttggaagaaaaggtatagaaattcagcgttataaa
ggtcttggagaaatgaatgctgatcagctttgggatacaactatgaatcccgaacagaga
actttagttcgtgtgtcattgaaagatgctgttgaggcagatcatatcttcaccatgctt
atgggcgaagaagttcctccaagaagagaatttattgagaatcacgctctatcagttaag
atgaataatttggatatttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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